result

Gene information

Detail information of AfisC8G05159

Location

Gene	Chr	Start	End	Strand
AfisC8G05159	chr8	942703576	942704272	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020691744.1	6.7e-37	GATA transcription factor 4
Swissprot	O49743.1	2.7e-35	GATA transcription factor 4
trEMBL	A0A2I0XI11	4.8e-37	GATA transcription factor 4

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G60530.1	50.29	2e-38	155	GATA4	GATA transcription factor 4

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g46105.t1
Allium fistulosum	AfisC8G05159
Allium sativum	Asa1G00630.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00320.24	GATA	Domain	120	154	59.8	1.3e-16

Gene Ontology

Accession	Ontology	Name
GO:0000977	F	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001085	F	RNA polymerase II transcription factor binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0003682	F	chromatin binding
GO:0006366	P	transcription from RNA polymerase II promoter
GO:0005634	C	nucleus
GO:0005667	C	transcription factor complex
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007623	P	circadian rhythm
GO:0008270	F	zinc ion binding
GO:0009416	P	response to light stimulus
GO:0009845	P	seed germination
GO:0030154	P	cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network