result

Gene information

Detail information of AfisC8G05486

Location

Gene	Chr	Start	End	Strand
AfisC8G05486	chr8	1009758539	1009759832	+

Sequences

CDS

Protein

Gene

>AfisC8G05486
ATGATGACCAGAAACAAGAACAAGCAACATGGGCCTACTAAATTGGTATCGGAGCAGCCTGATGAGCCAGAAACCTCCCCTCGTCACTTCAACGATCCTGAAAATGGCCACCAAGATGATAGCAACCTCTCCATGCCTGATCTTGATGATGAAAATGAATTTTGTGCAAAGGCAAGAACACAAAAGTTAATGAACCACCAATGCATTAACACAACTGCAAGCAGCAGAGCAAGAACTCCATAACTCCGATCAAAAATTGCATCAAACTCTGCAAGAAAAATCTCAAGAAATGAATGGTAAAATGGATCTCTTAACTGCAATCATTGATTCTTTAATTCAAAAAATAGAAGTTAGCAAGAATTCATCCATAGCCACCCCTCAAGAACAACAGCATAGCCAAAGAAACCTCTCTTATATCCCTTCTTTCCAGAGATTTCCTATTAGAAATCCCACTAAAATACTCTATAATTTTGATCAAACCCCACCTGCAAATACAAGAGCAGCTCCATACATACCACCATATCGAAGATCTCCAACTAAAAACCTTCAAAAAGCAACGATTCAAAAGGAAGCAAGCTCATCATCCAATGTCAGACCCCATCTTCTAAACCACACCACTTGCTCCATCAAGAAATTAGAAGAAACAACTCAAAGATTGTCCACAAATACTCAGATGCAAGTCAACAGCAAAAAATTATGTGTTATATGTCGGAAATAGGGGTCTAAGATTTGTTCTAAATGTAAGAGTGTTATATATTGCTCTGAAGCATGTCAATCAAAGCATTGGCATGCAGGTCATAAATTGAAATGCAAGTCATCAATTCCTTCGAAAGATTCATGGTATTCAAATTTTAAAGAAGTCATTCATCCAAACAACTTATAAAACTTAACAGAAGATAATAAGGGAAATGCATGTTCAGGCAGTGCTTTGTGGAAATATTCTTATAATGAATTATCTGCTGCCAGCAATAATTTCAGTGATGATTGTTTATTGGGAAGAGGAGAATATGGTTATGTTTATGTAGGAAAACTGAAGCGCACATGCCAGATTCTGGCTATAAAGAAGCTTCATAATAATGATGGTCATCAACGTTATTTGCATCTTAAGCACAATCCACCAGTTATACATAGAGACCTGAAACGCTCTAATATATTGCTGGGGGAGGGTTACCATGCCAAATTATCATATTTTGGCTTTGCCAAAGAAGGACCAGCTGGTGATAAACCTCATGTTGGAACAGCTATCGTAGGAACTGATGGAGATATTTCCCTTGAATATGCCAGTACAAATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	TQE13214.1	5.0e-20	hypothetical protein C1H46_001298
Swissprot	Q1PDV6.1	2.3e-17	Receptor-like cytoplasmic kinase PBL27
trEMBL	A0A6V7QFP9	2.1e-20	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18610.1	67.69	1e-18	89.0		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G05486	AT5G18610.2	65	21	105	169	197	261	67.69	1e-18	89.0
AfisC8G05486	AT5G18610.1	65	21	105	169	197	261	67.69	1e-18	89.0
AfisC8G05486	AT5G13160.1	65	24	105	169	200	264	63.08	6e-17	83.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	105	153	31.5	1e-07

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009555	P	pollen development
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network