result

Gene information

Detail information of AfisC8G05833

Location

Gene	Chr	Start	End	Strand
AfisC8G05833	chr8	1075848497	1075850060	-

Sequences

CDS

Protein

Gene

>AfisC8G05833
ATGTTTGAGCGGGCTATCGGATTTGCACCATCTGGGGAATACTGGCGCCACCTACGCCGTATTTGCTCTGCAAGCATATTTTCTCCGCGTAGAATTAGAGAATCAGAGAGCTTGCGCCAAAGAGTTTGTGATGATATGATTGAAATAGTAAGCAATGAAATGCTTAAGGAAGGAAAGGTTATCTTGAGGGATGTTCTGCAAATAGGATCTTTGGATAGTGTTGTCGGTAGTGTGCTAGGGATAAATCTGAGTAAAATGGAGAATAGTGAAATTGTTGAGTTGGTTAGAGAAGGGTATGAGTTAATAGGAATGTTTAATTGGGAAGATCATATTCCTCTTGGTGGAATTTTAGATATCAATGGTGTTGGGAGAAGGTGTAGAAAGTTGTGTGATTCAGATGTTATCGCTGTGCTTTGGGTGAGAAATCTCGTGTTTATTAAATTTTCCCTTCTTGCACACACCTTCACATAATATTATATACCGGGTACACATGCTTCCAAGTTCAGTATCTGTTAGTTGTTTTAGTTATCAAGTCCTGATTTTCATTTGCAGCCTATCTATTAGTTCCTTTGGTAGATTATGTTGAAATTAAGATAGCGAGGCCCATGCCAGCAATTGAGCAGTATGAGAATCTCCCTCTTTTCATATGATTTTCATTGACAAACAAGTGGCAGATTATTAAGCAGTAGTTGTATTAGATAACAAAACGATGAATTATAATCTAATTTAATATGACAACACTATCCTATGTGCTCAGTAGCTTTTCAAAGGGATAAGGACCTCAATAAGATCATCAACAGAACCAGCCTAGAATATCCATTTTTATAAATCTACGTGACTCATAAGACAAATATTGCTCCATCCACTTTCTTTAGAGAGCTATTAAAAATTATATAACCATTCCTTTCCGGATCATGGATAACCAATTACACAATATGGATAATAGCCATTGGAATAATATTGATGGCTGCTCGCTGGATTTGATGATGCTCAATTACATTGCAGGTAACAGCATCATTTTTAAGTGATGCCTTGGTAATATTACATTTCTAACATGATTTTTTTTTAATTTTGACTTACCGTGGATCATTTAGTGGTTGGAGTGACCAAGTATTGGATTTAGATGAAACAATAAATGTCATTCCTCTATCCCAGAGATATCCTTTGGACCCTCTTTTAGATTCTGGTGACCTTTTTGATGGTATTATTATAAATATGTACCTTGTACACATTTTCCTTTGTTTCATAAATCAAGTTTTAACTTGAATAAATTAAAATGACAGAATTCAACACCATCTTCAATGACTTGAGTGCTGAGATAGAGAAGTCAAAGCTGAGTAACACAATATCTGCCGATGATCAGAAGAAAGAATTAAAAGAAGAAAGAAGAAATGAGAATAAAATATTGGTGAAGGAGAAGAGTAGCAACAAGGAAGAAAAAGTTTTAACATTTGAACAAGTATCAAAGTGCTTTTACATGCCAATTACGCAAGCTGCAAATGAATTGAACATGGGCCTAACTTTTTTGAAGAAGAAGTGTAGAGAACTGGGAATTCCTTGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010917534.1	1.7e-38	cytochrome P450 78A4
Swissprot	Q9FIB0.1	2.8e-25	Cytochrome P450 78A7
trEMBL	A0A8K0IYW2	7.3e-39	Putative Cytochrome P450 78A5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74110.1	46.72	9e-29	124	CYP78A10	cytochrome P450, family 78, subfamily A, polypeptide 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G05833	AT1G74110.1	137	64	2	1	129	142	277	46.72	9e-29	124
AfisC8G05833	AT5G09970.1	135	69	2	1	130	147	281	45.19	4e-28	121
AfisC8G05833	AT1G13710.1	137	76	2	1	131	126	262	40.15	6e-23	104

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02042.12	RWP-RK	Family	237	274	44.7	8.9e-12

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0016491	F	oxidoreductase activity
GO:0006355	P	regulation of transcription, DNA-templated
GO:0010075	P	regulation of meristem growth
GO:0048316	P	seed development
GO:0048367	P	shoot system development
GO:0048504	P	regulation of timing of organ formation
GO:0051302	P	regulation of cell division

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network