result

Gene information

Detail information of AfisC8G05834

Location

Gene	Chr	Start	End	Strand
AfisC8G05834	chr8	1076400967	1076402641	+

Sequences

CDS

Protein

Gene

>AfisC8G05834
ATGCAGATTCGTGGGTCCTTAGAGAACTATTGGATTATCTCTGATTCTCTCAACGGTATGCATATAGTTAAATTTATATTTGATTTTCTTGTTCTAGTTGTGGCGGTGCATAAGTTATGGTAATTAAATATGCATAAAAACATGTATCTGTTAGGAAATTGATTGAATGGATTCATGTTACATACTATATGTTGACACATTGAATTCTATCCATCGCCCTAATTTACAAATAAACTTAAATGCAAATCGTAAAAATAAAAACAGTAATCTTTATAAATATCTGAACATGTCACACGAGGGAGGAGCATTGAAGTATTTTGATGTTCAATGCAGCACAATTACACTAACAAAACTGAAAAATAATATCTTTAATCTAATGGTTTCACGTAATTTGGTTAACCCTGCATTGTTAGAGCATAAGTGATCCAAGAGATTCATAACTCAGTTATAATAATCGATTAATATTAATCATCTGTCAAACTACAAATAGTATATGCAGTTATATTATATATTTATACTCTATAAATAGCATGCCAGCTGTGCTTTATTTGCTGCTTAAATTATTTATGATTTGTCAGATTTCTTTTATGACATTTGTCTTGGATAAGGCTTTTATCATTTAGAATGTCCATTCTCATCTTGGTTCATGTCTGTCCATGCCAACTGATGAGGCTAACATTTATTTAGCTCATAATTCACATGGTGTTCATTTCTTCAATGCAAATGCTCAAGAAGTATCACATTGTTTACTTGGTGCAGTTCTTTCTTTACTTTGCTAAAGTCTGCAGTGAACAGAGGCAGATGCAGTTGGTTAAGTGGGTTGCTTCTAGATGGGTACACTTTCTTGATATTTAAGTTGCTGATTTGGATGATGGCATAGTCAAGTAAACTTTTCATTTATCTTCGTTCATCACAAAATAGTAATAGTTGTGGTCATAACATATATGTTATCATGGTACATAAAATGGATGCATTCCCAATGGTCAAGATCATAATGGCTTTGTCAATGACACCATCTTCATAGTTGCTGAGCATGTTTCTAATGGAAATTTAAGGAGCCATCTTACTGGTATTATGTTCAAAAATATCAGATTATATGCTCTATTGGTAGTTTAATACACTCTGGTGCTAGATACTCATGTGTGTGTGTATAATTTCAGATTGGAGGAAGAGAGAGATGCTGAAATGGCCACAGAGAGTATCGACAGTCATAGGAGTTGCAAGAGGACTACAATTTTTACATACAGTTACAGTTCCAGGCATTTTTGGTAATGATCTTCGAATTGAGAATATATTGGTTGATCAAACTCTTATAGCCAAAATCAGCAACTACAATCTACCGGTACTACTGAACAATAAGAACAAGAAGGTAAGCACAACACTTAGATTCAAGATTTTCAACCCATTTGAAAGTATATTCAAAACTTGAATGTTTTCAGGCTGGTTCAGAAAGCCCATTTGGAAAACTAGACAACAATGACAATGGAAGGTAAATTCTTTTCCACACTTCCAAAACAATCATTTGTTCAATAATTAGCAGTATAATAAGGTATCAGTGTTTCATTTTTTTAGTTATCCAAATATGGAAAATGGCGAAAAGGACGATGTGTATCAGCTTGGCCTCATTCTACTAGAAGTAATTACAGGCAAGCCAAATGGATCAAAAGATCAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008793492.1	6.9e-44	probable LRR receptor-like serine/threonine-protein kinase At1g14390
Swissprot	Q9M9S4.1	2.7e-29	Probable LRR receptor-like serine/threonine-protein kinase At1g14390
trEMBL	A0A8B7C7V6	5.0e-44	probable LRR receptor-like serine/threonine-protein kinase At1g14390

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G14390.1	50.78	3e-30	127		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G05834	AT1G14390.1	128	56	2	5	131	531	652	50.78	3e-30	127
AfisC8G05834	AT2G02780.1	119	47	2	13	131	538	644	50.42	1e-28	121
AfisC8G05834	AT3G03770.2	125	60	3	17	138	569	684	42.40	5e-22	99.8

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	17	130	33.5	2.3e-08

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0042742	P	defense response to bacterium
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0005768	C	endosome
GO:0006468	P	protein phosphorylation
GO:0008289	F	lipid binding
GO:0046983	F	protein dimerization activity
GO:0042802	F	identical protein binding
GO:0009416	P	response to light stimulus
GO:0009741	P	response to brassinosteroid
GO:0009793	P	embryo development ending in seed dormancy
GO:0009908	P	flower development
GO:0048646	P	anatomical structure formation involved in morphogenesis
GO:0030154	P	cell differentiation
GO:0032989	P	cellular component morphogenesis
GO:0044446	C	intracellular organelle part
GO:0048580	P	regulation of post-embryonic development
GO:0048827	P	phyllome development
GO:0048878	P	chemical homeostasis
GO:0090558	P	plant epidermis development
GO:0098588	C	bounding membrane of organelle
GO:0098805	C	whole membrane
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network