result

Gene information

Detail information of AfisS142G00001

Location

Gene	Chr	Start	End	Strand
AfisS142G00001	scaffold142	61945	65376	+

Sequences

CDS

Protein

Gene

>AfisS142G00001
ATGGGAAATTGCTGTACATCACCAGTCGATCCGTCTGATCGCCCGCCCAAAAAAACCAAACCCACCAAAAACAAAAACAAAACTAAACCCTTCTCTGACAACTCCGGATATGCCGGAAAACACGTTGCTGTCCTGAATTCTCCGACCGGAATAGTCATATCCGCCAAATACACCTTGAAAAACGAACTGGGACGCGGCGAGTTCGGTATAACCTACTTATGCACAGATAAAGATACAGGAGAGAACTACGCATGCAAATCAATATCCAAGCAGAAGTTGAGGACAGCTGTGGATGTGGAGGATGTGAGGAGGGAGGTTGAGATAATGAAGATTTTGCCTGAGCATGAGAATATAGTGAGGTTGAAGGAGACTTATGAGGATGCACATGATGTGCATTTGGTCATGGAGTTGTGTGAGGGCGGTGAGTTGTTTGACCGGATTGTGGCTAAGGGAACTTATACGGAGCGGGCAGCTGCAAGTGTTTTGAAAACTATTGTCGAGGTTGTTAAGGTAAATTTTTTATTTTGATGGGATTTATACAATATTATTAGTTCATAAAATTGTTTAATAGTGATAAAGATAACAGCCATATTTTTAGCTAGTAGAGTTGAAGTTGGGGATTGTAGGCAAGTATAGTAGAAGTGTTTAAATTAAAAGGATGTCTAATAAAATATTTACATGAAGCTGTGTAAATGGAGAAGAATTAGCAACATTTGTTTCTGGAATTCCGATATGAGTTAAATAGAAGGTTATAAGAATCACCTGTCAGGAGCATAGATAATTGTACTCGGTAGCTTGAACATGGATGTAGATGGTTCACAATAATAGGTAGGTGCCAAATTTGTCAAGGAGATAATGGAAGAAATTGATTTTGAAACATGTTGTTAATGCTTAATATCGTTGTTCTGCGAATCTGAATTATTTCAAACTATCTAAAAACATAGATTTGCCACAAGCATGGAGTGATTCATCGCGATCTCAAGCCTGAAAATTTCTTGTTCGCTAACAAGAAAGAGATATCACCACTCAAGGCAATAGATTTTGGGTTATCAGTGTTTTTCAAGCCAGGTATAAATGGACCGGTTGGACATATAAATATGGTATAAAACTATCTATATGCTTTTTGTTAAATCATTTTAATTTTTTTGGGGAGCTATTTTCTTAGATTGTAGGCAGTCCCTATTACATGGCTCTGGAAGTGTTGAAGCGTAATTATGGACCTGAAATTGATGTATGGAGTGCAGGAGTCATACTCTACATACTACTTTGTGGCGTTCCACCATTCTGGGCTGGTAAAATTCTTTGAAACGAAAACCTATAGGCGATGTATGATATTTCAATAATTTTAAGATGTTTGGATGAAAATGTTTGAGTTTGGTTGTTCTTATGCAGAAACTGAACAAGGGGTTGCCCAGGCAATCATACGTTCCAGATTAAATTTTCAGAGAGATCCATGGCCTAGAGTTTCAGACAATGCTAAAGATCTTGTGAAGAAGATGCTCAATCCTGATCCTAAAAGACGACTGACTGCTGAAGAAGTACTTGGTAATACACATCGCTCCTTTTTTTTTAGTGTCTGTGCGTGCATCCATGTGCTTGCACATATACACATGTGCATGCATGCATTAAAAAATCGATGTTAATATCAGGATTTTCATTGAATAAACATGAACAAAAAATACTGAATGGGCTCACCTTTACTATGGCTGAGCATGTGCATAGTACTTACACTCGGTTTTCCTCTTCTACTATAGCTTAATGTAATAAATTTTGAAACAAAGTGCCCTGCTATTTGTTATTGACTAATTCAGTGAAAATGTTCAAGCGACAAGACATGTGTGTTAGCATATGTGATGGTGAAATAATCTGTTATCCAACGTAAAAACCTGTAAAAATTAGTTGTGCAAGGAACTTTATATTTTATAGCTAAAATAACATTCTGCCGCTTTTAATTTGCAGATCATCCATGGTTGCAGAGTGCTAAAAAGGCCCCAAATGTTAATCTTGGTGAGACCGTGAAAGCTAGACTCCTACAATTTACAGTGATGAATAAACTCAAGAAAAAAGCTTTAAGGGTAAGCTACTTCTTCCATGTCTTTTGACAACATTCTGGATGTGAATTGAATGTTATTATCGGTTTGTTTGCAGGTAATTGCTGAGCATTTATCCGTAGAAGAAGTAGCTGACATAAAGGACATGTTTTTGAAAATGGACATTAATAACAATGGAAAAATAACATTTGACGAGTTAAAATCTGGTCTGCATAATCTTGGCCATCAGTTCTCTAACACAGATGTTAAGATTCTAATGGATGCTGTAAGTACAGAAAATTAGATTAAACATATTCTAATATATTTCAATCTTAAGAATAAATATTATGAGAATAATTTCATAACGTCTGGCTAGAATGGTTTGAAAGAAACCATAAATTATACTATGATGATCAGATGTATCTCATATATAGCAGGAACACAAGATAAACTTTGATATGCTGCTTATTGATAAAACATCCCACATCCATATATAGGATTTAGAATATGATTGGATGTATCTCCCCTTTGCACTATCAAAAGTCAATCTCCTTTGAGTTTCAGAATAAGAGCTAAAACTGCTTTTCAACCTTCCGACTTCTGTATCTTCAAGTGGAGAAATATAGTGCACAAGGTTGAGCTCTTTGGTATTCGATTTTCTAGAGAGGTCACCTTAAATAGCAGCCTCATGTTATGCATTCTAAGCAGCCGTACACAAAATTTGAGTCTTTGATTCACATCAGTAATGAAGTTCTTTAAACTGACTGGTGCTCTAGTTATGTAAATCTTTGGAAATAAAAGTAGCTTTTTGAGCATGATTTTTATCTTCTAAAACCCGGGTGTGTGTGCACACACATACATATTTTTTCCTTATATATACATACTACATACATACAAATCCTAAAGGGTCGCCCATTTGATAAGGTGTGAGATTGGGTGACAACATTCAGGATTCCGAGCACCAATAATGGTGGCAGACATAACACCGTGTGAATTATCTGAAGTATATGTAATGGGTTCAACGCATATTTTCTTCGAGTTTACAAGCGTATGCTTGATTCTCTGGATCATCAATTTATACATACGCACCCAAGGTTTCCTAATAGATTTATTTTTAGTGATCCTTGCTGGTCTACATAAAAATGTTTTCCAACTAGAAGCTCATCACAGTTATCTTGTCCAGGCTGATGTAGATGGAAATGGTACATTAGACTATTGTGAATTTGTTGCTGTATCAGTTCATGTAAGAAAGATTGGAAACGATGAGCATCTGCACAAAGCGTTCGCCTACTTTGATCAAAACAGAAGTGGATATATTGAGATTGATGAGCTCAGAGAATCTTTGATCGATGACTTAGGTACTGACCATGAAGAAGTCATCACTGCCATAATGTCCCTATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257982.1	8.6e-211	calcium-dependent protein kinase 20-like isoform X1
Swissprot	Q84SL0.2	7.9e-201	Calcium-dependent protein kinase 20
trEMBL	A0A5P1FFQ9	6.2e-211	Calcium-dependent protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G12480.1	71.69	0.0	707	CPK7	calmodulin-domain protein kinase 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisS142G00001	AT5G12480.1	484	123	5	1	475	1	479	71.69	707
AfisS142G00001	AT5G19450.2	477	138	2	1	475	1	477	70.65	695
AfisS142G00001	AT5G19450.1	477	138	2	1	475	1	477	70.65	695

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	57	314	244.5	1e-72
PF13833.3	EF-hand_8	Domain	374	423	36.4	2.9e-09
PF13202.3	EF-hand_5	Domain	436	456	18.2	0.0012

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004698	F	calcium-dependent protein kinase C activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009536	C	plastid
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0018105	P	peptidyl-serine phosphorylation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network