result

Gene information

Detail information of AfisS2197G00001

Location

Gene	Chr	Start	End	Strand
AfisS2197G00001	scaffold2197	20792	21097	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	QHU23674.1	1.7e-07	IST1
Swissprot	Q9S7P5.1	5.7e-08	Squamosa promoter-binding-like protein 12
trEMBL	A0A6M3DDS7	1.2e-07	IST1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G02065.2	50.00	3e-10	60.5	SPL8	squamosa promoter binding protein-like 8

>>>Show top 3 blast result

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03110.11	SBP	Domain	63	101	36.0	5.5e-09

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005739	C	mitochondrion
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009941	C	chloroplast envelope
GO:0010321	P	regulation of vegetative phase change
GO:0044212	F	transcription regulatory region DNA binding
GO:0043565	F	sequence-specific DNA binding
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0048653	P	anther development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network