result

Gene information

Detail information of AfisS43G00001

Location

Gene	Chr	Start	End	Strand
AfisS43G00001	scaffold43	72055	73242	+

Sequences

CDS

>AfisS43G00001
ATGGCACATCAAGAACAATCTAGTGAAATGCACTGCTCGTTTCATGAAGGTGACCATGAAGGCGAACTAACCCATTGCAATTACAGTGAGGAGTTCCTAAAACGTAGAATCCAGAGTGACACAAATCTTCTCAACCGCATAAGAAAAGGCAACCTCATGATTCAAAACCATCAGACAGTCCATCCCAACACGCACGCACGACAAGACACCCAAGGCTTCGTGTACGGCATCGTAACAGAAAACGGCAAGACAGTCTCCGCCGCTTCGGATAACCTACGTGGGTGGTGGAAGGAGAATGCGAGGTTTGATTTGGATGGTCCGCTGTCTATAGAGAAGTACAAGTCTGTAAACTTGTGTCATCGGAGCGAGAAGAAGGCCGACATAAACATCCGTGAAAGACTATTGGAGATTCAGGACACAACACTAATGTCCTTGCTTTCAGCTCTTATGCCGCACTGTGACCCACCCCAAAGGAAGTTTCCTCTGGAGATGGGGGCACCCCCTCCTTGGTGGCCCACCACGACCGAACAATGGTGGTCTGAACTTGGGTTCCCAAATGATGATAACCGGCCTCCACCGTATAAAAAGCCTCATGACTTGAAGAAGGTGTGGAAAGTTGGAGTTCTTGTTTCTGTACTCAAACACATGTCGCCAAATACAGATAAAATAAGGCAACTGATTAGGCAATCGAAAAGCCTTCAGAGTAAAATGACTGCAAAGGAGAGTATTGCTTGGTTCGAGGTTCTTGATCAGGAAGATCGGGATTTTCAAAGACGCTGCATGGATTTGCCTAATCTGTTTACTAAGTGTAAAAATGCTAGGAAGTTGGATTCTGTAGGAAATGAGGAAGGCAATCAATTTGTTGCATGTAAACGAGTTGCACTGCCAGGGCATGAGTTGAATAAGAATAAGAGTGCTCAGGATAATCAGTCCAGTCGTAGCTCACACACCGATTTTGTTCGATATAATACAAATACAGATAGCATGATGAAACTGAATTCTAATGCAGACGTGGTTGAGGATTTGTGTTATGTGCCTGAGTTGAGTATCGAGAGTAACGGTGATCATCAGAGTAATGGTGATTACAGAGTTGATAAAGCTGCTGAAGTGGTACAAGATTATGGTTTTTCTGATATGATGGGAAATTTGAATGGCTTGGAAGATTGGTTTGGGTCCGGTAGCGGTTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253600.1	4.7e-61	protein ETHYLENE INSENSITIVE 3-like
Swissprot	Q10M41.1	2.0e-53	Protein MAO HUZI 6
trEMBL	A0A5P1FKJ4	3.4e-61	ETHYLENE INSENSITIVE 3-like 1 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G27050.1	60.85	1e-63	240	AtEIL1;EIL1	ETHYLENE-INSENSITIVE3-like 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisS43G00001	AT2G27050.1	189	66	3	70	253	113	298	60.85	1e-63	240
AfisS43G00001	AT3G20770.1	186	70	3	70	253	112	296	60.75	2e-62	236
AfisS43G00001	AT1G73730.1	193	84	2	70	262	103	292	54.92	1e-59	227

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	69	252	277.3	8.8e-83

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0010182	P	sugar mediated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network