result

Gene information

Detail information of Asa0G00005

Location

Gene	Chr	Start	End	Strand
Asa0G00005	scaffold10011	38878	41870	-

Sequences

CDS

>Asa0G00005.1
TGATACTTCCTAAACAGAGACACAAGGCTTTCTTGAGTTTTAGAGGGAAAAGGACTAAAAGCGCGAAACATGAGCTCAGCGACAACGAAAATACCGAAAATTCTGATCAAAGCTCACCACGAGGAGTTTTCGAAACATCAGTATCAAGCACTGATTCAGATAGTGGAAGCAGCACTGAAATCTCATCAATAGAGAGGTCAAGTAGTTTAAGATGGAGAAATGTTTTTGGAGGATTCTTATTCAAGCATAATAAGTCAATGAGGCGCCTTAGTACATTTCCTCCTATAATTCGAAGCTCAATGGAGATTGAGGTGCGGGAACAAGAAATGTTGAAGGGTAGACATTCATGGAGAAGCTTCGATTATCAAGAGCTTGTAGCTGCTACTAATAATTTCAGTTCAGATAAGCTAATTGGAAAAGGAGGGCATGCCGAGGTATACAAGGGTTGTCTTCCTGATGGGCAACTGGTGGCCGTGAAAAAGCTAACAAAAAAGCAGACTGAAGATGAAAGAACCAGAGATTTTCTATCAGAGCTGGGTATCATAGGTCATGTTAACCATCCAAATGCTGCACAGTTACTAGGATTTAGTGTTGAAGGAGGATTATATCTTGTTCTGCAATATTCACCTCATGGAAGCCTTGCTTCTGTGCTCCATGCTTCAAAAGGCGGACTAGAGTGGAACATCAGATTCAAAATTGCATTAGGCATCGCAGAAGGACTATTATATCTTCATGAGGGATGTCAAAGACGTGTTATTCATAGAGATATCAAAGCATCTAACATTCTTCTCACTGATGATTATCAGCCTCAGATCTCTGACTTCGGGCTTGCAAAATGGCTTCCACATGGTTGGAACCATCATATTGTGTCTCCTATTGAAGGAACTTTCGGTTATTTGGCCCCAGAATATTTTATGCATGGAGTGGTCAATGAGAAAATTGATGTCTTTGCTTATGGTGTTTTGCTGCTTGAGTTAATCACCGGACGTCGTGCTGTTGACTCATGTAGGAAGAGCCTTGTAATCTGGGCAAAGCCATTGCTCGATTCAAACAACATGAAAGAACTTATCGACCATTCCTTGGTTGATGCTTATGACTCTGATGAGATGAAGCGTGCAGTTTCAGCTGCTTCGATGTGTATTCACCACCTTTCTACAGCACGACCTACTATGAATTCCGTTGTTAGCCTTCTGCGAGGCGAAAAAGAATCAATGGACATGATGGGCAGAGTGAAGAAGCAGACTGCGTCAAAACCTGCTCCTTTGTTTGATGCAGGGGATATGGAAGACTACACTTGTTCAAGATATCTCAATGATTTGAACAGACACAAGCAACTTGCAATGGAACAGTAG

Protein

Gene

>Asa0G00005.1
TGATACTTCCTAAACAGAGACACAAGGCTTTCTTGAGTTTTAGAGGtaataattttttccaattttttttatacaattctaactttatttttcatttttttttccaaaaaattaaCTCTAAAAAAATAGGAGTTTATTAATGTGGGAAGATAAACAATAACGTATAATGAGTTCAGTACAAAAAAAGTAGTTTGATGGGAAGCCCAGCTGATTTCATTATAACATGTCATGGATGCCAtaagtgttttatttttaatttgtcttCCCCCAGCTTTCTGTAATAACTAGTAGAAAAGTATAGATGGAGTTACTGGTTTCCTATTATAAATTCATGTAAGAAAATATATTCCATCGAAGGAGAAACAACAGAAGTTTGAtctttcaaaacagtttaaacCATAACTTCTTAAAGTTGCAACAAAATAATGAAATAGGAAATTTGGTGAAATAACCAGTTTTTAGTGATAGAGTACACAATAAAAATCACTGTTTTTCTTACACGTAATGAATCACCTTTCTAACTTAAATACAGGGAAAAGGACTAAAAGCGCGAAACATGAGCTCAGCGACAACGAAAATACCGAAAATTCTGATCAAAGCTCACCACGAGGAGTTTTCGAAACATCAGTATCAAGCACTGATTCAGATAGTGGAAGCAGCACTGAAATCTCATCAATAGAGAGGTCAAGTAGTTTAAGATGGAGAAATGTTTTTGGAGGATTCTTATTCAAGCATAATAAGTCAATGAGGCGCCTTAGTACATTTCCTCCTATAATTCGAAGCTCAATGGAGATTGAGGTGCGGGAACAAGAAATGTTGAAGGGTAGACATTCATGGAGAAGCTTCGATTATCAAGAGCTTGTAGCTGCTACTAATAATTTCAGTTCAGGTGAAATTTTTTGTCATATTTTTCCCATGTAGATCCGTTAAGATACCACTAGTTTTACATTGTCTCTCCAGTCCAGTAAAACAGTGTAAAAAATAGATGTGTTGGTAGATTTAAACACACCAAGTCTTACATTGCACATATGTAcagtatttaaaaatatatttcgacATATGTATAATAATTGTGACCATACTgcaatatatatattagataagcTAATTGGAAAAGGAGGGCATGCCGAGGTATACAAGGGTTGTCTTCCTGATGGGCAACTGGTGGCCGTGAAAAAGCTAACAAAAAAGCAGACTGAAGATGAAAGAACCAGAGATTTTCTATCAGAGCTGGGTATCATAGGTCATGTTAACCATCCAAATGCTGCACAGTTACTAGGATTTAGTGTTGAAGGAGGATTATATCTTGTTCTGCAATATTCACCTCATGGAAGCCTTGCTTCTGTGCTCCATGGTACATCTTTCATCCTCGTGTGCATGTACTTTCGTAACTATGTAAATTATGTGGTCATCTCTACAAGCTCATCTACAATAGAACGATCAATCAAAACAATGTATGTACCATGAAAACGTAAATATGAGTTAACTTTCGAGTTTTTGCAGCTTCAAAAGGCGGACTAGAGTGGAACATCAGATTCAAAATTGCATTAGGCATCGCAGAAGGACTATTATATCTTCATGAGGGATGTCAAAGACGTGTTATTCATAGAGATATCAAAGCATCTAACATTCTTCTCACTGATGATTATCAGCCTCAGGTAAAATACTTCGCTTCTTGTATATTCTGAAACATAAAGTCAACTGATGGGCGTATTTTTTTATAGGTTAATCGAATGCATTTTTTGTTATTTCAATGATCCAACATATTAAATCCATCAATGCAGATCTCTGACTTCGGGCTTGCAAAATGGCTTCCACATGGTTGGAACCATCATATTGTGTCTCCTATTGAAGGAACTTTCGGGTAAAAActgtagatttttttttcttctatagttATTACGCTTATGCTTATGGCTTTTGTATACATGATGTGCAGTTATTTGGCCCCAGAATATTTTATGCATGGAGTGGTCAATGAGAAAATTGATGTCTTTGCTTATGGTGTTTTGCTGCTTGAGTTAATCACCGGACGTCGTGCTGTTGACTCATGTAGGAAGAGCCTTGTAATCTGGGTACACATAAATTTGATCTTTATAGCAAATTAATGCACTAGTGCATATAAAACATTACTAGGAGGGCAGAAAACACAGTACGAATTTAGGCCCGAATTGATAACGACCATAGGATTGAAAACATTGAATtcggcccgggggggggggggggggggggggggggattgatgTTGTTTCCCCACATCGTTTTGTCCCTATTTTGGGCCCTCAAAGCATTCCTGGTGCATATAATTTCATACTGGCTATTGTTAGAAAACCACATATTATCTCCATATCAGTTGACAATGTGATTTCTGTAGGAGGAGCATGGTAATTTTGGTACGCTAAATAATCTTTGTAGCAAAATAATGCATTTAAGTTCATGCTGGTTACTGTTAGAGAATCTCATATAATAAGAAAACTAATTGACAATGTGAAGAGCGGTTTAAtagtttttatttagaattttgtTTTATGAACTGTCCAATAGGAGACTAAGCACAACAACTATGCCAACTGTTTTTATAACTGCGCAGGCAAAGCCATTGCTCGATTCAAACAACATGAAAGAACTTATCGACCATTCCTTGGTTGATGCTTATGACTCTGATGAGATGAAGCGTGCAGTTTCAGCTGCTTCGATGTGTATTCACCACCTTTCTACAGCACGACCTACTATGAATTCCGTAAGGGTTGCCTGTATAACAATGATAATCTGTTATCTTTTTTATATGAAtgagttgatttttatttgtacaaatgTAGGTTGTTAGCCTTCTGCGAGGCGAAAAAGAATCAATGGACATGATGGGCAGAGTGAAGAAGCAGACTGCGTCAAAACCTGCTCCTTTGTTTGATGCAGGGGATATGGAAGACTACACTTGTTCAAGATATCTCAATGATTTGAACAGACACAAGCAACTTGCAATGGAACAGtag

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244255.1	2.2e-176	receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2
Swissprot	Q8H1D6.1	5.6e-116	Protein ROP BINDING PROTEIN KINASES 1
trEMBL	A0A8B9AXK8	3.3e-169	receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G65530.1	58.68	3e-125	445		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G00005	AT5G65530.1	380	135	6	84	448	84	456	58.68	3e-125	445
Asa0G00005	AT5G10520.1	384	149	5	84	448	91	467	54.43	3e-120	428
Asa0G00005	AT5G18910.1	393	170	5	71	447	117	506	51.91	3e-115	412

Ortholog group

Species	Genes
Allium cepa	g132328.t1
Allium fistulosum	AfisC6G05267
Allium sativum	Asa0G00005.1
Arabidopsis thaliana	AT5G10520.1; AT5G65530.1
Oryza sativa	LOC_Os06g45350.1; LOC_Os06g45350.2; LOC_Os06g45350.5

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	132	394	146.7	7.2e-43

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network