result

Gene information

Detail information of Asa0G00239

Location

Gene	Chr	Start	End	Strand
Asa0G00239	scaffold11204	187927	189498	-

Sequences

CDS

>Asa0G00239.1
ATGGCTCTGCTTGTAGTATGGCTTCTCTTTCTTTCACCATTGATCTTTTTTCTTTGTTCTTGGCTAACAAAGAGAGCTGAAAACAATAATAAAACGTTAAACCTTCCACCTGGCCCCAAAACACTTCCTGTAATTGGAAATCTGCATCAACTGGGAGACCCTTTGCATCGATCTTTATGGACGCTCTCCCAGAAGCATGGGCCACTCATGCATCTGAAGCTGGGTTCTAGACCAGCTCTTGTGGTTACTTCTCCGCATATGGCAAGAGAAGTGCTCAAAACTCATGATCTCGACTTCTGTAGCAGACCAAAAAATTTAAGCGGGGATAAATATGCTTATAATTACTCGGATGTGAGCTTGTCGCCATATGGAGAATCATGGAGACAGATGAGGAAGATATGCATTCTCGAACTTTTTAGTGCTAAAAGGATGGAGACGTTCAGGTTTGTGAGAGAAGAAGAGGTTTCACTGATGGTTCAGTCGATTGCAGCGGCCTCTGATATGTCCAATCCCGTTGATATCAATAAAGAGATGACTAAACTTGGCGCATCATTACCCGAGTTGCTTTTGGCAAGAAGATATTTGATTGATAAAATAAGCGGGCGAATTTCAAAGATGGAGAAGAACAGTGCCAGGCTTGATGCAATTTATGATGAAATCATAAAGGATCATCTTCATTCCAATAAGACCGAGGCTGACCATCAAGATATAGTTGATGTTTTGCTTCGTTCAAAAAAGGACGACGTGCGTGTCACCATGGAAAATGTTAAGGGAGTTCTTATGGATATGTTTATAGCAGGAACTCAAACTGTGTCATCAACAGTAGTTTGGGCGATGTCAGAACTTGCAAGAGATCCAAGCTCGATGAAGAAAGCACAAGAAGAGATGAAACTCTATGTCAAACAAAACCAAAGTACAATTCGTGAAGGAGACCTTGACAGCCTTCAGTACATCAAATCGATTGTAAAAGAAACCCTACGACTGCATGCACCTCTTCCACTGCTTCTCCCTCGAGAAGTAATGCGAGATTGTAAAATTGAAGGATATGACATAATGAAAAACACAATTGTATATGTTAACGCTTGGGCAATAGGAAGAGATCCTAAGACGTGGGACAGAGCAGAAGAGTTCATACCGGATAGATTTTTGAATAGTTCGATTGATTACAAAGGTCATGATTTTGAGTTTATTCCATTTGGTTCCGGTAGAAGAATCTGCCCTGCTATGAATACAGGAATTACAGTCACAGAGCTCGCGCTCGCCAATTTATTGTACTGTTTTGACTGGACGTTACCTTCTGGGATTAATCGTGAAGACATTGACATGGAGGATGCACCTGGAATCTCCTTGCGAAAGAGCAATCCACTCGAACTTCTAGCTATAAAAAAGCACATTTAA

Protein

Gene

>Asa0G00239.1
ATGGCTCTGCTTGTAGTATGGCTTCTCTTTCTTTCACCATTGATCTTTTTTCTTTGTTCTTGGCTAACAAAGAGAgctgaaaacaataataaaacgtTAAACCTTCCACCTGGCCCCAAAACACTTCCTGTAATTGGAAATCTGCATCAACTGGGAGACCCTTTGCATCGATCTTTATGGACGCTCTCCCAGAAGCATGGGCCACTCATGCATCTGAAGCTGGGTTCTAGACCAGCTCTTGTGGTTACTTCTCCGCATATGGCAAGAGAAGTGCTCAAAACTCATGATCTCGACTTCTGTAGCAGACCAAAAAATTTAAGCGGGGATAAATATGCTTATAATTACTCGGATGTGAGCTTGTCGCCATATGGAGAATCATGGAGACAGATGAGGAAGATATGCATTCTCGAACTTTTTAGTGCTAAAAGGATGGAGACGTTCAGGTTTGTGAGAGAAGAAGAGGTTTCACTGATGGTTCAGTCGATTGCAGCGGCCTCTGATATGTCCAATCCCGTTGATATCAATAAAGAGATGACTAAACTTGGCGCATCATTACCCGAGTTGCTTTTGGCAAGAAGTTAGAAAGAGATTTTAATACCATCCTCGGACAGTTTGAGGAAAATCTGGGAACTTTATACCTTGCTGACTTTTTCCCTGTACTAGGATATTTGATTGATAAAATAAGCGGGCGAATTTCAAAGATGGAGAAGAACAGTGCCAGGCTTGATGCAATTTATGATGAAATCATAAAGGATCATCTTCATTCCAATAAGACCGAGGCTGACCATCAAGATATAGTTGATGTTTTGCTTCGTTCAAAAAAGGACGACGTGCGTGTCACCATGGAAAATGTTAAGGGAGTTCTTATGGTATTTCCATCTTCTATTGCGGAAtgtataagaaaaataataataatagtagtagtaaatAATAGTAACTAAATTGCCATTTTTTCAGGATATGTTTATAGCAGGAACTCAAACTGTGTCATCAACAGTAGTTTGGGCGATGTCAGAACTTGCAAGAGATCCAAGCTCGATGAAGAAAGCACAAGAAGAGATGAAACTCTATGTCAAACAAAACCAAAGTACAATTCGTGAAGGAGACCTTGACAGCCTTCAGTACATCAAATCGATTGTAAAAGAAACCCTACGACTGCATGCACCTCTTCCACTGCTTCTCCCTCGAGAAGTAATGCGAGATTGTAAAATTGAAGGATATGACATAATGAAAAACACAATTGTATATGTTAACGCTTGGGCAATAGGAAGAGATCCTAAGACGTGGGACAGAGCAGAAGAGTTCATACCGGATAGATTTTTGAATAGTTCGATTGATTACAAAGGTCATGATTTTGAGTTTATTCCATTTGGTTCCGGTAGAAGAATCTGCCCTGCTATGAATACAGGAATTACAGTCACAGAGCTCGCGCTCGCCAATTTATTGTACTGTTTTGACTGGACGTTACCTTCTGGGATTAATCGTGAAGACATTGACATGGAGGATGCACCTGGAATCTCCTTGCGAAAGAGCAATCCACTCGAACTTCTAGCTATAAAAAAgcacatttaa

Functional annotation

Database	accession number	e-value	annotation
nr	ONK57596.1	4.9e-150	uncharacterized protein A4U43_C09F2110
Swissprot	Q9LXM3.2	2.7e-113	Cytochrome P450 71B38
trEMBL	A0A5P1E9F8	3.5e-150	Cytochrome P450 71A9-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G26190.1	44.04	4e-113	405	CYP71B21	cytochrome P450, family 71, subfamily B, polypeptide 21

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G00239	AT3G26190.1	470	219	4	35	461	28	496	44.04	4e-113	405
Asa0G00239	AT3G44250.1	467	212	5	35	459	28	493	45.40	1e-111	400
Asa0G00239	AT3G26280.1	491	237	7	15	461	15	499	41.55	1e-111	400

Ortholog group

Species	Genes
Allium cepa	g190701.t1; g280721.t1; g326107.t1; g35978.t1; g432010.t1; g432050.t1; g50734.t1; g50737.t1; g63165.t1
Allium fistulosum	AfisC3G01145; AfisC3G01149; AfisC3G01155; AfisC3G01162; AfisC3G01208; AfisC3G01209; AfisC3G01216; AfisC3G01225; AfisC3G01232; AfisC3G01234; AfisC3G01235
Allium sativum	Asa0G00239.1; Asa0G02885.1; Asa2G00488.1; Asa2G00807.1; Asa2G00808.1; Asa2G00824.1; Asa2G00826.1; Asa2G00827.1; Asa2G00833.1; Asa2G00835.1; Asa2G00836.1
Arabidopsis thaliana	AT1G13090.1; AT1G13110.1; AT3G26170.1; AT3G26180.1; AT3G26190.1; AT3G26200.1; AT3G44250.1; AT3G53290.1; AT5G35715.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	36	180	75.5	3.2e-21
PF00067.19	p450	Domain	184	452	223.9	3.1e-66

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00517	CYP81F; indol-3-yl-methylglucosinolate hydroxylase	EC:1.14.-.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network