Detail information of Asa0G00348


Location
GeneChrStartEndStrand
Asa0G00348scaffold117745588156149-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAFX61404.11.3e-35deficiens
SwissprotQ944S9.23.1e-26Protein SUPERWOMAN1
trEMBLK7WHJ39.4e-36Deficiens

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54340.147.622e-1783.6AP3;ATAP3K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag137611.t1; g424573.t1; g536218.t1
Allium fistulosumAfisC1G01208; AfisC1G02131; AfisC3G01125; AfisC4G01915; AfisC4G03414; AfisC4G04014; AfisC7G06283; AfisC8G05089
Allium sativumAsa0G00348.1; Asa4G02647.1; Asa4G03347.1; Asa4G03348.1
Arabidopsis thalianaAT3G54340.1
Oryza sativaLOC_Os06g49840.1; LOC_Os06g49840.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain13034.59.6e-09

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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