Detail information of Asa0G00406


Location
GeneChrStartEndStrand
Asa0G00406scaffold12000115398116456+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010930725.11.8e-105NAC domain-containing protein 48
SwissprotQ7F2L3.19.5e-88Protein STRESS-RESPONSIVE NAC 2
trEMBLA0A6I9RQC81.3e-105NAC domain-containing protein 48

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G01720.159.474e-91 331ANAC002;ATAF1NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag479739.t1; g80428.t1
Allium fistulosumAfisC2G08321; AfisC5G00888
Allium sativumAsa0G00405.1; Asa0G00406.1; Asa6G06353.1
Arabidopsis thalianaAT1G01720.1; AT5G08790.1
Oryza sativaLOC_Os01g66120.1; LOC_Os01g66120.3; LOC_Os05g34830.1; LOC_Os11g08210.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily913293.97.4e-27

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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