result

Gene information

Detail information of Asa0G00499

Location

Gene	Chr	Start	End	Strand
Asa0G00499	scaffold12487	15805	18239	-

Sequences

CDS

Protein

Gene

>Asa0G00499.1
ATGAATGAAGAAGGTAACAAGGTGAAGCCCTTTAAGCAGTGTATATCTTCAGGAAATGGTAATGTTGATGAAAATCCGACTGTTGAGGAAAATATGGAGAAATGGAATGAGAAAGATATTCTGCCTGTGAAAGTAGATGATGTTGAAAAGGGGGATAAAAGTGAAAATAATGTCAGAAAGGAATATGTTCGTAATAGCGTAGATATACCTCTCTTCACTACTGGAGAAAAAGAAATAAGTGCAAAGGAAACGGAAAATGGCATGTCTTCTACCTGTGATGAGAAACAAGAAGTTAATGATATATTACAAGATAGTATAATGGATGAATTGGATTGCTCTTCAATTAGTAGtagtattaaaagaagaaaaagaataatttcaAGGGGAATAAGTTTGAAGGGGACAGTGTGATTATTGGAGATGAAGAGTTGAAAAATTAGTGACCGCCGAGCTTTAATATTGTTTGGTAGAAGTCTTTAACTCAACTCATTTACACATTTACATTCTAGCTTCTGAGATCTGATATTTTAAGCCATGTCATTCGGTTATACATGCTTGCATGCTTGCTTCTAGctgccatttcaaattcaaaaatgcTAGGAAGCCCGAAACAAGTGTTTCTAGCAAAATTGCGAGCAACGTGGAAAAAAGGAAGTGGCTGAAAACTGGAAGAGAGAGATAAGATGGGTAAGAAATGACAAATATACCCCCTCCCCCGAATTCAACGTGGGGGCCTATTTTGGTTTGGGCTATCTAGCACAGttctttcaaatttcctttcattCTCAAAAACccaatcagtatcaaattcaaacCTTCGCTTATTATCTGTTCAGCTTTCGCTTCTCTTCGGCCTCGAGATCTACTCTTTATATTAAGTAATGGATTATGACGAAGAAGAAGTGGACTCATCGCCACCGTCAACCCAGCAACAAATCTCTGAACCCTACCTTCTAGGATTCATCATCTATAACATAGTTGGTCTCAAATACTATTCCGGCTGCATAAATAACCGCGAACTAATCTGCCTCGTCTGCGAACCTTTAAACCAGTACAACCCAAACGCCATCAAGGTTCTCAACACTCGCTCTGTCCAAATAGACCACATCGAACGCTTTGTAGCCGCCGTACTCGTGCCTCTCTTGGTCGGGAATCATCATTCTCGAATGCATCGTACCAAAACCACCAAAAAACCGTAGCCCTTTTCGACTTCCATGCCAAATCCATGTATTTACTTCACAAGAATCATTCTTTCTTGTTGGTACTGCTATTGAGGAGGCAGGGTTGAGTCTGGTTACGGGGATTGATCACGAGTTTTCAATGTCCGAGAGTGTTGCTGTTAAGGAAAGTGGAAATCAGAGTAAAATTAATGTGGCCgatatattttagaatattttcaACAATGGTCTTCAAGAACTGGTGAGGGTCGATCCAAATAAAGTTGTGATATTAAAGGAGTTGTTTGAGCATCAAAAAGAAGGATTGGGTTGGTTGATAACACGTGAGAGCGCGAAGGATTTGCCTCCATTTTGGGAGGAAAAAGAtggtttatttttgaatttgttgaCTAACCATGAGACAAACGAACATCCTGTGCCTATCAGAGGTGAAATTTTTGCAGATGATATGAGTTTGGGTAAGACTTTAACTTTACGCTCTTTGATTGCTACTAATAGAAATACAGCTAGTGGTAGTACACTAGTACTGGTTTAGGAGCATGTAAGGGTAAGAAGAAGTCAAATGTCATCCAAAAGGTCGCGAATCCAAGAAAGAAACAAAAGGTTACTGATGATAGGTTAGATATAAGTGAAAAGATCGTAGGCCCGAAAGCAACTTTGATTGTATGTCCAGCATCCGTTTTATTGACATGGGTGGATCAGTCAGAACAACATACTAGACGCGATAGTTTGAAGGTTTATCTGTATCATGGAACAAGGAGTAAAGATGTTGAAGAGTTAAAGAGCCATGACATTGTTTTGACAACCTTTTAATACATTGGGTTCTGAGTTTGGTAGTGATATAGTTCTCCTTTAGTTAAGACTGAGTGGTTCAGGGTTACTATAGACAAGGCACATATGATTAAGAATTTTGCGGCTGGACAAAcaaaagcattcattgctttgaaGGCAGAAAGATGGTGGGCAGTGACTGGGACTCCTATTCAGAACAATCCATCTGATTTGTTCTCACTTATGGCCTTTCTAAGGTTTCAGCCCTTTTCTATTAAGAGTTGTTGGATGAATCTGGTGCAACGGCCATTGGATCAAGGGAACAAGAATGGACTATCCCGTCTTCAGGCTTTGGTTGGAAGCATATCTTTGCGGAGGATGAAAGAAATGCCAGATGGTAGCCAGAGCTTGCTTGGCTTGCCACCTAAAACGTCAGAGACATGTTATATTGAACTTTCAAGTGAAGAACGAGAGCAATATGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK63800.1	1.4e-68	uncharacterized protein A4U43_C07F19070
Swissprot	Q9FF61.1	1.0e-55	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
trEMBL	A0A5P1EIA0	1.0e-68	Helicase ATP-binding domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G05130.1	63.04	4e-46	181		DNA/RNA helicase protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G00499	AT5G05130.1	138	46	1	175	312	403	535	63.04	4e-46	181
Asa0G00499	AT5G05130.1	79	32	0	104	182	195	273	59.49	9e-23	104
Asa0G00499	AT5G22750.1	140	79	1	174	312	557	696	42.86	1e-27	120

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00176.20	SNF2_N	Family	179	312	100.7	6e-29

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0005524	F	ATP binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15711	SMARCA3, HLTF; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3	EC:3.6.4.- 2.3.2.27	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network