Detail information of Asa0G00536


Location
GeneChrStartEndStrand
Asa0G00536scaffold126332437224683-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrATG31847.12.7e-32cycling dof factor 8, partial
SwissprotQ8LFV3.24.6e-21H-protein promoter-binding factor 2a
trEMBLA0A291FGD41.9e-32Cycling dof factor 8 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G47500.161.181e-23 104CDF3cycling DOF factor 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag189953.t1; g40934.t1; g463157.t1
Allium fistulosumAfisC2G05921; AfisC6G04768; AfisC7G01978
Allium sativumAsa0G00536.1; Asa0G04982.1; Asa3G01472.1; Asa3G03350.1
Arabidopsis thalianaAT3G47500.1; AT5G62430.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02701.12zf-DofFamily24779.11.8e-22

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16222CDF1; Dof zinc finger protein DOF5.5EC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.