result

Gene information

Detail information of Asa0G00684

Location

Gene	Chr	Start	End	Strand
Asa0G00684	scaffold13405	53371	55561	+

Sequences

CDS

>Asa0G00684.1
ATGCTTATACAGTTGATCATTGCGGCTTTCGCCACTACCTCATTGGCCCATGAGTCTGCTGAGTCGGAGTTTCTAAAGACATGCCCGCCTTCCCGATGCGGATCCATTCCGATACGCTTTCCGCTCCGTCTCCAATCGGATAACCCAAGGTGCAGTTTGGAGGGTAAATCCAAATATCTCATATGCTCCCCAGACAATAGAACGCTTCATCTTCCAACCTTTCCTCAATACAAAATCACAAACATCAGCTACGTAGACCGACTGCTCACATTGGATATTGGACCCATATCTTTGTCCAAATTCGAATCTTCCCCTTGCCCGCTCCAAAATCTCAGCACCGTAGTGCACGGTTTAGCAGTTAATTTGCTATATGACTGCGGGTACTCTCCATGGGCTTATACAGCAAAATTTGTGCGCTGCTCCAAAAAATTAAGTCTCCTATCAAATTCTGTTAGGGATGATTACCGAATAGCGGGTCCGATACCATCATGCCACGAGAAGGCCAAATATTTTGTGTACCTTGCTTACAACTATGAACATATGGATGTACTGGGGCATGATTGCGACATATTCGGGGATGAAGCAATGATTCCTCGATATTCATATGCATTTTCTGATGATGTTTATGAATTTATGGCGCAAAAGGAAGTCAAACTCCATTTATCTTTGGACCATGGAATTTGGGATGATGAATGCTCTGAGTGTGAACTGAAAGGCAAGTACTGTGGGTTTGATTGGGGAAGAAATCAAACCTTTTGTCTTCATCACGGTGAGCTCTATCTTCAACCTTATCAATTCAGAACATCCATAAGTGGATTTCTCATTCTCCTAGCCATGTCAATCATTTTTCTTTATATATCAAAGCGGTCAGCAAAGGAAAAGGAAACGTGGTTAAAAGTAGAGAAGTTTTTAGCTACATACAAGACCACAAAACCTACTCGATACACTTTAGCACAACTCAAGAAAATAACAAAGAGATTTAGATATAAATTAGGCCAAGGTGGTTTTGGAAGTGTGTACAAAGGGGAACTTCCCAATGGTATCCCCGTAGCTGTAAAAATGCTAGAAAATTCAAAAGGAGAGGGAGAGGAGTTTATTAACGAAGTTTCAACTATGGGGAGAATCCATCATTTCAACGTAGTACGACTATTGGGATTTTGCTCGGAAGGTAGAAACCGTGCTCTTATATATGAATTCATGCCAAATCAATCACTAGAGAAATACATATTCTCGAAAGAGGGTAGCAGATTCGAAGGACTATTGAACATGGAACAGATGTTGGATATTGCAATTGGAGTTGCTCGTGGTATCGAATACTTACATCAAGGATGTGATCAACGCATCATGCATTTTGATATAAAACCTCACAATATTTTGTTAGACCACAACTTCAACCCAAAAGTTTCAGACTTTGGGCTTGCAAAGCTTTGTGCAAGAGATCAAAGTATTGTTACAATGACTGCTGCAAGAGGTACGATGGGCTACATTGCACCTGAGATTTATTCAAGAAACTTTGGTGAAGTGTCTTATAAGTCAGATATCTATAGTTTTGGAATGTTGCTTTTTGAAATAGTAAGTGGTAAAAGAACCATCGAACCAATAATGGTCGAGAATCATGATGAGATTTATTTTCCAGAATGGATATATTACAAGATAGTCGATGGTGGAGATATTGGTTTGGATATAGAAAAGGGAAAAGAAGAAGATATAGTGAGAAAACTAGTTATGGTAGGATTATGGTGCATTCAATTGAATCCAAATGATCGTCCTACCATGACGAAAGTACTTAAGTTTTTAACTGGAAGTTTGGAAAGTTTGCAGATTCCGCCCAAGCCTTTTTTCTGA

Protein

Gene

>Asa0G00684.1
atgcttATACAGTTGATCATTGCGGCTTTCGCCACTACCTCATTGGCCCATGAGTCTGCTGAGTCGGAGTTTCTAAAGACATGCCCGCCTTCCCGATGCGGATCCATTCCGATACGCTTTCCGCTCCGTCTCCAATCGGATAACCCAAGGTGCAGTTTGGAGGGTAAATCCAAATATCTCATATGCTCCCCAGACAATAGAACGCTTCATCTTCCAACCTTTCCTCAATACAAAATCACAAACATCAGCTACGTAGACCGACTGCTCACATTGGATATTGGACCCATAtctttgtccaaattcgaatcttcCCCTTGCCCGCTCCAAAATCTCAGCACCGTAGTGCACGGTTTAGCAGTTAATTTGCTATATGACTGCGGGTACTCTCCATGGGCTTATACAGCAAAATTTGTGCGCTGCTCCAAAAAATTAAGTCTCCTATCAAATTCTGTTAGGGATGATTACCGAATAGCGGGTCCGATACCATCATGCCACGAGAAGGCCAAATATTTTGTGTACCTTGCTTACAACTATGAACATATGGATGTACTGGGGCATGATTGCGACATATTCGGGGATGAAGCAATGATTCCTCGATATTCATATGCATTTTCTGatgatgtttatgaatttatggCGCAAAAGGAAGTCAAACTCCATTTATCTTTGGACCATGGAATTTGGGATGATGAATGCTCTGAGTGTGAACTGAAAGGCAAGTACTGTGGGTTTGATTGGGGAAGAAATCAAACCTTTTGTCTTCATCACGGTGAGCTCTATCTTCAACCTTATCAATTCAGTTTGTATTTAACAatcagaaatttaatttttatgtgtGTGTAGGAGAGAGGACCGGGGAAACCCCACGTTTTAATTATACAATCAACTTGCCCCTTGTCATTGAAGTCTATATGCTTCGGCTTGGCCGCACATCTACtatgaaaaatgaccgttttcacgttgaaaacttaaaatttaaaacatatgcaTCATTAATTTCTGACACATGTGCTTCTCTTTACATTTGCAGGTCCTAATAACAGTTCCAATGTTCAGCTCATTGTAGGTGTGTCCCGTAACATATCAGTCGATTATACATGAGATATTTCTTGTTCAATTTACTATATTGTAACTGATCGATGCAGGAACATCCATAAGTGGATTTCTCATTCTCCTAGCCATGTCaatcatttttctttatatatcaAAGCGGTCAGCAAAGGAAAAGGAAACGTGGTTAAAAGTAGAGAAGTTTTTAGCTACATACAAGACCACAAAACCTACTCGATACACTTTAGCACAACTCAAGAAAATAACAAAGAGATTTAGATATAAATTAGGCCAAGGTGGTTTTGGAAGTGTGTACAAAGGGGAACTTCCCAATGGTATCCCCGTAGCTGTAAAAATGCTAGAAAATTCAAAAGGAGAGGGAGAGGAGTTTATTAACGAAGTTTCAACTATGGGGAGAATCCATCATTTCAACGTAGTACGACTATTGGGATTTTGCTCGGAAGGTAGAAACCGTGCTCTTATATATGAATTCATGCCAAATCAATCACTAGAGAAATACATATTCTCGAAAGAGGGTAGCAGATTCGAAGGACTATTGAACATGGAACAGATGTTGGATATTGCAATTGGAGTTGCTCGTGGTATCGAATACTTACATCAAGGATGTGATCAACGCATCATGCATTTTGATATAAAACCTCACAATATTTTGTTAGACCACAACTTCAACCCAAAAGTTTCAGACTTTGGGCTTGCAAAGCTTTGTGCAAGAGATCAAAGTATTGTTACAATGACTGCTGCAAGAGGTACGATGGGCTACATTGCACCTGAGATTTATTCAAGAAACTTTGGTGAAGTGTCTTATAAGTCAGATATCTATAGTTTTGGAATGTTGCTTTTTGAAATAGTAAGTGGTAAAAGAACCATCGAACCAATAATGGTCGAGAATCATGATGAgatttattttccagaatggatATATTACAAGATAGTCGATGGTGGAGATATTGGTTTGGatatagaaaagggaaaagaagaagatataGTGAGAAAACTAGTTATGGTAGGATTATGGTGCATTCAATTGAATCCAAATGATCGTCCTACCATGACGAAAGTACTTAAGTTTTTAACTGGAAGTTTGGAAAGTTTGCAGATTCCGCCCAAGCCTTTTTTCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009386370.1	2.8e-169	PREDICTED: rust resistance kinase Lr10-like
Swissprot	P93604.1	3.6e-158	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	A0A804K6M0	2.0e-169	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G70250.1	49.15	5e-92	335		receptor serine/threonine kinase, putative

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G00684	AT5G38280.1	307	132	6	314	614	320	620	53.09	4e-92	335
Asa0G00684	AT1G70250.1	352	164	7	270	614	406	749	49.15	5e-92	335
Asa0G00684	AT1G66920.1	396	204	8	227	614	202	586	43.69	5e-91	332

Ortholog group

Species	Genes
Allium cepa	g204240.t1; g259076.t1; g259119.t1; g259122.t1; g275842.t1; g280172.t1; g280654.t1; g313679.t1; g404317.t1; g443394.t1; g463385.t1; g499832.t1; g506373.t1; g65487.t1; g70598.t1; g92872.t1
Allium fistulosum	AfisC2G00224; AfisC2G00225; AfisC2G00285; AfisC3G08478; AfisC3G08613; AfisC5G00949; AfisC5G03848; AfisC6G04204; AfisC6G04205; AfisC7G01505; AfisC7G01508; AfisC7G01513; AfisC7G05170
Allium sativum	Asa0G00684.1; Asa0G01056.1; Asa1G03948.1; Asa1G03949.1; Asa2G04130.1; Asa3G03635.1; Asa3G03640.1; Asa3G03641.1; Asa3G03642.1; Asa3G03643.1; Asa3G04042.1; Asa4G00018.1; Asa5G00174.1; Asa5G00214.1; Asa5G00216.1; Asa5G00673.1; Asa5G00678.1; Asa5G00709.1; Asa5G00713.1; Asa5G01143.1; Asa6G02219.1; Asa6G04678.1; Asa7G02339.1; Asa8G03324.1; Asa8G06229.1
Arabidopsis thaliana	AT1G66910.1; AT1G66920.1; AT1G66930.1; AT5G38240.1; AT5G38260.1
Oryza sativa	LOC_Os01g02290.1; LOC_Os01g02290.2; LOC_Os01g02360.1; LOC_Os01g02400.1; LOC_Os01g02400.2; LOC_Os01g02400.3; LOC_Os01g02420.1; LOC_Os01g02430.1; LOC_Os01g02440.1; LOC_Os01g02460.1; LOC_Os01g02560.1; LOC_Os01g02580.1; LOC_Os01g02600.1; LOC_Os01g02690.1; LOC_Os01g02700.1; LOC_Os01g02710.1; LOC_Os01g02730.1; LOC_Os01g02750.1; LOC_Os01g02770.1; LOC_Os01g02790.1; LOC_Os01g02810.1; LOC_Os01g02840.1; LOC_Os01g04460.1; LOC_Os01g04480.1; LOC_Os01g04490.1; LOC_Os01g04520.1; LOC_Os01g04550.1; LOC_Os01g04570.1; LOC_Os01g04570.2; LOC_Os01g04580.1; LOC_Os01g49580.1; LOC_Os01g49614.1; LOC_Os04g09770.1; LOC_Os08g24630.1; LOC_Os08g24670.1; LOC_Os08g24770.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	330	597	161.3	2.6e-47

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network