result

Gene information

Detail information of Asa0G01036

Location

Gene	Chr	Start	End	Strand
Asa0G01036	scaffold15041	27167	28346	+

Sequences

CDS

Protein

Gene

>Asa0G01036.1
ATGGAAAAAAGCAAGCTGCTCAGAAGCTATGGTGACATTGGCAGCAACCACAAAGAGAGCTGTCAAGATGTACAACTTCAAGTGGCACCTTTCGTCTCCAAAATTTATCAAATGGTCAATGACCCCATAAGCGACCCTTTAATTAGATGGGGAAGAGATAACAATAGCTTCTTAGTGTTAAATCCTTCGGATTTCTCCATCCTTTTGCTCCCTCTTTATTTCAAGCATGGCAATTTCTCTAGTTTTGTCCGTCAGCTCAATACTTACGTGAGTTATTCTCTCATCTTTGCCTTGCATTTTTGAACTATAGCTAGTCCCATATGTTATTGCTTCAACTTTCAATTATCAAAAAACTATTTTtgtagtttttattttagttttatgcTTAAGTTTATCATATAAATCCATAGAAGTGATAATACAGATGAATTTGAAATcggaaaaataaaattatcatagttCTTTCCTAGAGAGATAACCTCGTAACTAGTTGAGTTTTGCTGATTTCTAAGTACTttaatatttttacttcatttttttaatGTTCTTTCATGTATTTTATTTGGTATAGGGATTCAGAAAGGTGGATCCAGACAAGTGGGAGTTTGCACATGAGTCATTTCTACGATGCCAACTGCAGCTCTTGCCACTCATAGCAAGAAGAAACATTAGGAAAAATCATGAGAACGAAGAGACAAGGCATGAAACAAAAGAAGCATATGATGAAGAAAGCAACAATGAGATGTTACTTGAAGAAGTTGCAAAACTGAGAAAGGAGCAAAAATTGCTAGAAGAAGAACTGCAAGGCCTGAACCGAAGACTTCAAATTACCGAACAAAGCCCGCATCGACTGTATTCGTTTCTTGTTAAAGTAGCAGAGGACCCTGAACTGCTACATAGGCTAGTCCTCTCGAAGAAAAGGCGAATATTTGATGAGCAAGAGAGAAAAAGAACATTGTCTGATATGGTAGTTATTGATAATGAGTTTGCTGCTCCATTGTCTCGATCTTTTGAAAGGGATTACAGTCTGCAATCAGTGAATTTCGGCATTATAGATGGTAACGTTGCTGTTGATAAAATTGGACTGGAAAACCAGGTGGTTTTGCTGCATGACCTCGGTGAAACAGAGATGAAGAAAGTGGCTTACCCATTTTCATTGTTAGGCCATATGTTTCTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268219.1	2.2e-63	heat stress transcription factor C-1b-like
Swissprot	Q9LV52.1	4.1e-43	AtHsf-08
trEMBL	A0A5P1ESK9	1.6e-63	HSF_DOMAIN domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G24520.1	48.74	1e-49	193	AT-HSFC1;HSFC1	heat shock transcription factor C1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G01036	AT3G24520.1	199	85	2	28	221	15	201	48.74	1e-49	193
Asa0G01036	AT5G16820.2	220	96	5	28	215	25	242	40.91	9e-40	160
Asa0G01036	AT5G16820.1	220	96	5	28	215	25	242	40.91	9e-40	160

Ortholog group

Species	Genes
Allium cepa	g391331.t1
Allium fistulosum	AfisC5G01546
Allium sativum	Asa0G01036.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	31	120	92.4	1.8e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009408	P	response to heat
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network