result

Gene information

Detail information of Asa0G01254

Location

Gene	Chr	Start	End	Strand
Asa0G01254	scaffold16261	36304	39483	+

Sequences

CDS

>Asa0G01254.1
ATGGAAAAAGGCAGCGGTGGGGGTACAAGCCTGAACACAATGTCATCAAGTCCTATATACTTTGTTGATCATGAAAGTTCTCCGATAAAGAGGAAGCAGTCGTCAACGGCGCCATTATTTCAACAGCAATTCGAGCTCTTGAATCCTCATCACGATCGCACGAAATCTAAACATGTCTATGAAATGGATTTCTTCTCCAACGAGAAAAGGAAAGCACTTTGTGATACAAACGTCGATCTTAGAGCTTCAGAGAGTATTATCAAGAAGGAAGATTTGACCGTAAATACGGGATTAGGTCTCGTAACTTCAAACGTTGGAAGCGATCGATCAACTGTCGATGATGGACCGTCGCCTGCAAATGATGACAACAAAGAAGCAAAAAATGAGTTAGAGAGGATACAAACTCAAATGGCACGTATGGTAGAAGAAAATCAAAAGCTGAGAGGAGTATTAAGCCAAGTGACCCACAGTTACAATGCTCTACAAATTCAGTTCATCGCACTCATGCAGGGTCAGCAAAACGCTAACGTAAGAACATTATATCTTCTATATTCTGCAGATGAAATAAAAGCAGTCAGTGCAAAAAATCAAGAAAATGCAAGCACAATGATGCCTAGACAGTTCATGGATTTAGGACTAGCATCTGTTAATGAATCTAACATAGGCAAGCAATCTCAATCTTTAACTGAATTTCAAAGTCCGGAGAGCGCTTCATCTCCTGCTATAAGCAAGGATAATAGTCTGGATCAAGCACAAACATTAACTGGTTCAAAAGGATTACAGGAACCACAAGAGGCCACCATGAGAAAGGCTCGCGTTTCAGTCCGTGCCCGATCAGAAGCTCCCATGATTACCGATGGATGTCAATGGAGGAAATATGGGCAAAAGCTGGCGAAAGGAAACCCATGCCCACGAGCCTACTACCGGTGCACAATGGCAACCGGATGCCCGGTTCGCAAACAAGTACAAAGATGCGCCGAGGACCGTACGATCCTAATAACAACCTATGAAGGCAATCACAACCATCCGTTGCCTCCAGCCGCGATTGCAATGGCATCCACCACCTCTGCTGCAGCCTCCATGCTTCTATCCGGGTCAATGTCGAGCACGGACGGACTCATCATGAACGGAGCCATGCTTCCGTCCTCGTCGAGCCTTAGCCACCATTTCAGCTTCCGCCCCATTCCCTACGGTTACTTTGGACCTGACCCAGAACCCGAACCCGCTACAGTTTCAGAGGGCGCCTTTTCAAATGAATTTTCCGCAGCAGCCGCAGTCTTTGCCACAAGTGTTTGGGCAGAACATGTACAGCAGTAA

Protein

Gene

>Asa0G01254.1
atggaaaaaGGCAGCGGTGGGGGTACAAGCCTGAACACAATGTCATCAAGTCCTATATACTTTGTTGATCATGAAAGTTCTCCGATAAAGAGGAAGCAGTCGTCAACGGCGCCATTATTTCAACAGCAATTCGAGCTCTTGAATCCTCATCACGATCGCACGAAATCTAAACATGTCTATGAAATGGATTTCTTCTCCAACGAGAAAAGGAAAGCACTTTGTGATACAAACGTCGATCTTAGAGCTTCAGAGAGTATTATCAAGAAGGAAGATTTGACCGTAAATGTAAATCATATATTTCTCCTATTTGAGTTTCTTAGTAATTTAGTATTGACATAGTTTTTAGTACTTATGTTGTTTTCTTTTATGGGTTTCATTAGACGGGATTAGGTCTCGTAACTTCAAACGTTGGAAGCGATCGATCAACTGTCGATGATGGACCGTCGCCTGCAAATGATGACAACAAAGAAGCAAAAAATGAGGTAATTAAGCAATACATATTTGACTAGTTTACATTTTTTCTTCGATGACAGCTAGCTAGCTGATTAGAATATAATCATATCTCAGTCAAATATTGATTGTAATTAACTACAGTTAGAGAGGATACAAACTCAAATGGCACGTATGGTAGAAGAAAATCAAAAGCTGAGAGGAGTATTAAGCCAAGTGACCCACAGTTACAATGCTCTACAAATTCAGTTCATCGCACTCATGCAGGGTCAGCAAAACGCTAACGTAAGAACATTATATCTTCTATATTCTGTATTGTCATACGAAAAAGATACTTATGATGTTTAGTTTCTTTGTATATGAACAATTATgtaggcagatgaaataaaagcaGTCAGTGCAAAAAATCAAGAAAATGCAAGCACAATGATGCCTAGACAGTTCATGGATTTAGGACTAGCATCTGTTAATGAATCTAACATAGGCAAGCAATCTCAATCTTTAACTGAATTTCAAAGTCCGGAGAGCGCTTCATCTCCTGCTATAAGCAAGGATAATAGTCTGGATCAAGCACAAACATTAACTGGTTCAAAAGGATTACAGGAACCACAAGAGGCCACCATGAGAAAGGCTCGCGTTTCAGTCCGTGCCCGATCAGAAGCTCCCATGGTCAGCCCATTTTCCATGTTAATTCTCTAAATTATACGAATAAAACAGTTAATATAGTCACATCTTTGGATCTGAGACTTTGTCTCTTACGATGAACGGCATTTGTGTTTTATATTTTGAATCATCTGATTTCTAAAGAACCATCTTCGTATGATCATCGAAAGCATTTTCATGTTAGAGAATTGAGAACCTCTTATTACAACAGTAAATGTGACTTTGAAGTTTgcgtttgttttaaatttgaatacaGATTTCAACATACTTAATGTTAgtacaaatttttgttttcaatccatcgaattttgaaaagaagttcatttagtTTCATGATTATATTTttgcaatattttcaaaatttcatcagaTTGGAGTTGGGGACACATCAACACACTATAAACTAGGATTAGGTTAGATGATTTATACCCACTTAATATTCAATACCGTGATTGGACTTATTAGAATACCAGCCAGAGAATCATCAATCTCTATCTTTATGATTAATAACAATAGAATATTAACCAACATGATTTCCACTGCATgtctttttgaatttgaaaatattctaCATAGTTTATGTTTTCCAGTCGCTCATCAGTGAAATAATACTATTAATTTGTAGCAAGCACATCATCCTTTGTCATTCTTCATCAATGAAATTTGACTATTGATTTTCAATTTCCACTATTATAAAATTGTATGATAAGGCTTTTGTGATTAATAACGATTTTTCAACGCGAAAAcgatatttttgtaattaaaaatcttTGCACATTAAATATTTTAGAAAGTAAAAGCAAATTTTTTTTATTGAACGCTTGCATGTAAATGCATTTACACAAGGCTTTTAGGAAATAAGTTGACTCAAGTTCAAATTGTACCTAGCGCAGTGTTAAAATCAACTAAGTTCACGCTTACTGTTTTGAGGATGTGTTATCATGACAATAGTAAGTGTAACTTGAATGGTTTTATTAGTACACTTGgttttaattaatattgaataccTAGTACCGAATTTGCCTGTTTTTATTTCATAGATTACACGGAACTTgctttaattttacaaaaaaaaatctacATAGCATATGTTTTCCGATTACCCATTAATGAAGTAACACTATTAGTTTGTAGCATGCACGATCATCCCATTGTCATTCTTCATCTACGAAATTTGACTAATCTGCAATTTCACTACAATAGACTTGTCCGATAAGGCTGTTGTGATTAATAATGGTTTTCTGTTAACGACATACAGGCCATAAAAACAATATTATCGCAAAGGGGatttctatttaaacacaaaaatttgacacaatCGGTGATACAATTGATTTGCACAATCGATGACATAAAAAATTTAGTTTGtacattaaatatttttaaaattaaaagtaaatatgtttatttattgaAAGCTTACATTTATGtgtatttaatattagttattagataataAATTGACACAATTTCAAATTGTATTTAGTATAATGCTAAAATCAACTAAGTTTACGTACGTGTAACTTGTATGCTTTTAGCAAAtcacttgttttaaatattgaatacttAGTACTGAATTTGcctatttttatttcatagatTACCGATGGATGTCAATGGAGGAAATATGGGCAAAAGCTGGCGAAAGGAAACCCATGCCCACGAGCCTACTACCGGTGCACAATGGCAACCGGATGCCCGGTTCGCAAACAAGTACAAAGATGCGCCGAGGACCGTACGATCCTAATAACAACCTATGAAGGCAATCACAACCATCCGTTGCCTCCAGCCGCGATTGCAATGGCATCCACCACCTCTGCTGCAGCCTCCATGCTTCTATCCGGGTCAATGTCGAGCACGGACGGACTCATCATGAACGGAGCCATGCTTCCGTCCTCGTCGAGCCTTAGCCACCATTTCAGCTTCCGCCCCATTCCCTACGGTTACTTTGGACCTGACCCAGAACCCGAACCCGCTACAGTTTCAGAGGGCgccttttcaaatgaattttccgCAGCAGCCGCAGTCTTTGCCACAAGTGTTTGGGCAGAACATGTACAGCAGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916103.2	4.7e-78	probable WRKY transcription factor 31
Swissprot	Q9C519.1	2.1e-59	WRKY DNA-binding protein 6
trEMBL	A0A6I9R0Q9	3.4e-78	probable WRKY transcription factor 31

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G04450.1	43.98	2e-79	293	AtWRKY42;WRKY42	WRKY family transcription factor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G01254	AT4G04450.1	407	162	11	45	396	14	409	43.98	2e-79	293
Asa0G01254	AT1G62300.1	367	126	10	61	396	89	428	49.86	7e-78	288
Asa0G01254	AT4G22070.1	391	137	11	59	396	30	413	49.62	2e-72	270

Ortholog group

Species	Genes
Allium cepa	g423636.t1; g434073.t1
Allium fistulosum	AfisC3G08811; AfisC7G02642; AfisC8G01650
Allium sativum	Asa0G01254.1; Asa1G01967.1; Asa2G07276.1; Asa3G04980.1
Arabidopsis thaliana	AT1G62300.1; AT4G04450.1
Oryza sativa	LOC_Os01g14440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	286	343	93.2	8e-27

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01892	HARS, hisS; histidyl-tRNA synthetase	EC:6.1.1.21	Aminoacyl-tRNA biosynthesis	ko00970

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network