result

Gene information

Detail information of Asa0G01329

Location

Gene	Chr	Start	End	Strand
Asa0G01329	scaffold16729	37095	37971	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264063.1	2.1e-69	uncharacterized protein LOC109839993
trEMBL	A0A5P1EXA4	1.5e-69	CCT domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G53420.1	45.70	2e-40	162		CCT motif family protein

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Ortholog group

Species	Genes
Allium cepa	g166076.t1; g287657.t1; g288328.t1; g296114.t1; g349412.t1; g445049.t1
Allium fistulosum	AfisC1G09126; AfisC2G01393; AfisC2G02631; AfisC3G07128; AfisC4G01511; AfisC4G01526; AfisC5G02264; AfisC5G06182; AfisC6G01596; AfisC7G01376; AfisC7G04700; AfisC8G05502; AfisS1410G00003
Allium sativum	Asa0G01329.1; Asa0G01380.1; Asa0G01501.1; Asa2G05711.1; Asa3G03711.1; Asa3G03712.1; Asa4G05865.1; Asa6G06995.1
Arabidopsis thaliana	AT4G27900.1; AT4G27900.2; AT5G53420.1; AT5G53420.2; AT5G53420.3
Oryza sativa	LOC_Os05g51690.1; LOC_Os05g51690.2; LOC_Os05g51690.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06203.11	CCT	Motif	193	228	47.2	1.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K03539	RPP1, RPP30; ribonuclease P/MRP protein subunit RPP1	EC:3.1.26.5	RNA transport	ko03013
K03539	RPP1, RPP30; ribonuclease P/MRP protein subunit RPP1	EC:3.1.26.5	Ribosome biogenesis in eukaryotes	ko03008

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network