Detail information of Asa0G02300


Location
GeneChrStartEndStrand
Asa0G02300scaffold2196460326484+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWR81041.15.4e-58lysine-specific demethylase JMJ706-like protein isoform X1
SwissprotQ336N8.12.7e-54Protein JUMONJI 706
trEMBLA0A3S3MRI03.9e-58Lysine-specific demethylase JMJ706-like protein isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G46910.168.063e-58 220Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag197648.t1; g197649.t1
Allium fistulosumAfisC2G07926
Allium sativumAsa0G02300.1; Asa3G01323.1; Asa3G01328.1; Asa6G01319.1; Asa7G02421.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g46930.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02373.19JmjCDomain20143116.47.7e-34

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11446KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylaseEC:1.14.11.67 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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