result

Gene information

Detail information of Asa0G02522

Location

Gene	Chr	Start	End	Strand
Asa0G02522	scaffold23109	53271	56850	-

Sequences

CDS

>Asa0G02522.1
GTTGGCTGCGGCTGATGTAGCTATATCGCCGTCACCAAGCAATTCTAACAAGAAAGAGAGTAAAATCATTGCAACCACAGTGAGCCTTGTCATCGGGATTTTATTGCTTGCCTGCATCATGTACTGCATATGTAGAAAGAAGAAAAGAATTAGAAAAGCATGTGATATAGATCTATATAATGCAGAGAACTGGAATGAGGAAAGCATAAGGAAAGATGAAGACCTAGAGTTACCATTATTTGATCTAGAGTCCATGGTTGTTGCAACTGATAATTTTGCAGTTGTTAATAAACTTGGAGAAGGTGGATATGGTCCAGTGTACAAGGGTATCTTACAAGGGGACAAAGAAATTGCAATCAAGAGATTGTCTAAAGATTCCAACCAAGGAATTGATGAATTTAAAACTGAGGTTTCATTAATAGCAAAGCTTCAACATAGAAATCTTGTCCGACTGTTGGGTTGTTGCACACAAGGGGAGGAAAGAATGCTAGTATATGAATATATGCACAACAAAAGCTTGGATGCTTTTCTATTTGATAAAGCAGGTGGTAAACGTTTGGATTGGCCAACACGCTACCATATTATTACAGGAATTGCACGAGGGCTTCTGTACCTTCATCAAGACTCTAGGTTTAGAATAATCCATAGAGATTTAAAAACTAGCAATGTTCTTCTTGACAAAGATATGAATCCCAAAATTTCAGATTTTGGCCTAGCAAGGATTCTTGGTGGGGATGAAGCAACCACAAGAACAAAACGGGTGGTTGGCACATATGGTTATATGTCTCCTGAGTATGCAATGGATGGTGTTTTCTCAATCAAATCCGATGTGTTCAGTTTTGGAGTTATATTACTTGAAATTGTAAGCGGACAGAGAAGCAAAGGCGTGTTCCTCACTGAGCCACAGTCTAACCTCCTAATTAAAGCATGGCGTTTATTGACAGAAGATAGAGGAAAAGAATTAATCGACCCATCCATGGATCACGAGTTCTCTTTGGATGAAATTATAAGATGTATAAAAGTAGGCGTGCTATGCGTACAGCAAAAACCTGAAGCTAGACCAACAATGTCGTCGGTGGTGGTCATGTTGAGTGATCATCAAGATGCATCGGTTTGTAAGCCACAAGAGCCAGGGTTTACAGCAAGAAGAGATGTGTCTTCTCCTAATTCTTCTTCAAGTAACCATGATGTATTTACTAGCAACAGCATTTCCTTTTCAATGGAAGTGGGTAGATGA

Protein

Gene

>Asa0G02522.1
GTTGGCTGCGGCTGATGTAGGTGcgtctaaaaatgtagttttattccCGTTACTAGACTTCAGTGCTTGAATACTATCTGGTTCCTAAAATAtgttcaaagtttttttttttttttttttttttttttttttaaatcccagacggataaaataaaatagttttaatccattcaaatagaaatcgatgattGATGAAGAGATGCAACTGTTTGTGTTAAAACAGTTACATGTGTTCAAAAAATATGAGTAGTGACTAGTGAGTTTCAACTTTCAACAGCCATATACTCACTGTTTTGCTTTCTCGACTCCTGGATAGACAAGAAACTTTTGAGTGGACATAATCTAAAATTTATTCCATGTTATGAACAAACAATTTTTCGAACATTTAATGTATCATCATTATAATCTGCGAATAACATGTGGAATTTGACACAGTCGTGAAATGTAGgaaaataatattgaattttcTGTGGTCAACTTTACAATActattatctattttattattagttGAGTCACATTTTAAAACACATTACGTAGCTTCCTTCCCTGGAGGTAATTACTATTTTTTTATGTTTCGAGCTTAGAAGTCACACTATATAGTTTTTTCTAATgttgattgaatttgaaaagatgaaGTACTTTTCAGCCCGTTATAAAATTAAACTGATATTTGATACAATGTTGAATTATTTTTGGTATTATTGACTTAGCAATGTACGTTTTAAAATAGTGTGGTGCAAAGGGCACCCCCAATACGTTGTTCCTAATACCACAATTTAaaaaatagtgtggtgctaagaaTTGTTCCTGTACTGGGTTTAGCTGGTTGATCGGTTTAAAAAATGAGAACGAACGAATATCGAACgaaatagaaataaagtaaaacaatGTAGTAGCCCCTACTTTTTGAGTGTGTTTTTAAGAAGAGGGTAATACTAATTCTTTTGGTatttttttagtcgcggtattaggaagaacatattggggtgcccttagcacctcacttaaaatatattttaggtgGAGAAGTTGCCATCACCAATGCATAATTTGTATGCTTTTGCTGCTGGTGCTTTGACTTTTAAATCTTATGGTTGCACAACTCAAGCAACAATTTTTTATTAtctgtaaataataataaaaggtcAAACACAGAAACATACACCTTTCATATTATGAAACTAGATATTTAGATTGGGTCATGGAACTGCATAATTTGTTATGATTAATGATCCCGATAACTGCAAAAATGTTCCACCTAGGAATTATTCAATCAGTCTCTTTAAGTCAGAAGCTACTATCCTTATTTTCATTTGCTTTCAGCATTGTAAGGCACCATAGAAATAAGTTCTTATCATTCAACATATTAAATTCCGTtcgattcaaaaaataaaataaaaattgatgccTTAACAGCTATATCGCCGTCACCAAGCAATTCTAACAAGAAAGAGAGTAAAATCATTGCAACCACAGTGAGCCTTGTCATCGGGATTTTATTGCTTGCCTGCATCATGTACTGCATatgtagaaagaagaaaagaattagAAAAGGTACACTTGCATATTGATCACTTTTATATCTCATTTGATATGTGTATCTGCATGTGAATATCTGCAACTTTTTACTATCATTTGAGGGAAAATAATAACTCGGATTCATTATAATGTGGATGAGAACAATAGCATGTGATATAGATCTATATAATGCAGAGAACTGGAATGAGGAAAGCATAAGGAAAGATGAAGACCTAGAGTTACCATTATTTGATCTAGAGTCCATGGTTGTTGCAACTGATAATTTTGCAGTTGTTAATAAACTTGGAGAAGGTGGATATGGTCCAGTGTACAAGGTAGAATTACACACCTATTAGCGTTATTTATGGACTACCACATACCACTGCTTATGTTTAATGAAGAACAGTGCTAGTCACATGTTAAACATAACTGGTTGTAGCTGCATTCCTATCTCTAGACAAAAGATTGATGTATTGTTTcaatcatatactttattgtcTCCTTTTCTAAACAAACTAACTTGGATGCACCATATCAGAAACAAAATGCTTCATAATAAACGAGTCATCCAATCACTATAAGAGCACGCCCATTTTTGTTGTAACACTTTTGAATTTTGCATCTCTTCAATTTACAAACTTTGCTTTCATAGAATTCATGTCAGTAGCTTTTCACATTAGAACAGGCTGAGAAATAACTAATCTCTTAATATGAATCCTCATGTACAATTAAATGCATGTCAGGGTATCTTACAAGGGGACAAAGAAATTGCAATCAAGAGATTGTCTAAAGATTCCAACCAAGGAATTGATGAATTTAAAACTGAGGTTTCATTAATAGCAAAGCTTCAACATAGAAATCTTGTCCGACTGTTGGGTTGTTGCACACAAGGGGAGGAAAGAATGCtagtatatgaatatatgcacaACAAAAGCTTGGATGCTTTTCTATTTGGTAGTTTActtatattccattaattaaagaaaaatactTACCATAACAGAGTACTTATTTTAATGGTTGTGTATCATAATTCCAATGACAGATAAAGCAGGTGGTAAACGTTTGGATTGGCCAACACGCTACCATATTATTACAGGAATTGCACGAGGGCTTCTGTACCTTCATCAAGACTCTAGGTTTAGAATAATCCATAGAGATTTAAAAACTAGCAATGTTCTTCTTGACAAAGATATGAAtcccaaaatttcagattttggccTAGCAAGGATTCTTGGTGGGGATGAAGCAACCACAAGAACAAAACGGGTGGTTGGCACATAGTAAGAATAAATTCCTTTTAATAGCATTTTTTATACAAATTTTCACTTGAATGTTCATTTTCATTTATCTTAAAATACCCAGTGGTTATATGTCTCCTGAGTATGCAATGGATGGTGTTTTCTCAATCAAATCCGATGTGTTCAGTTTTGGAGTTATATTACTTGAAATTGTAAGCGGACAGAGAAGCAAAGGCGTGTTCCTCACTGAGCCACAGTCTAACCTCCTAATTAAAGTAAGTTTAAGAATATCCACACAAAGCACATTTAGCAGCTGTTTATAAGTAGTCAACTACTCATAACTTGTTCTTATTGTATGATAACAacttggaaaaagaagaaataagttGTTTGACATTTTCAAATGCAAGTTGTTTGAGTTGGAATTAAAATGCAAGTTGAATTGTGGTGAGAGAGATGCATTGTGAAACAAGATTGAAATTTTAAGATTTTCGATAATAATTTCAGGCATGGCGTTTATTGACAGAAGATAGAGGAAAAGAATTAATCGACCCATCCATGGATCACGAGTTCTCTTTGGATGAAATTATAAGATGTATAAAAGTAGGCGTGCTATGCGTACAGCAAAAACCTGAAGCTAGACCAACAATGTCGTCGGTGGTGGTCATGTTGAGTGATCATCAAGATGCATCGGTTTGTAAGCCACAAGAGCCAGGGTTTACAGCAAGAAGAGATGTGTCTTCTCCTAATTCTTCTTCAAGTAACCATGATGTATTTACTAGCAACAGCATTTCCTTTTCAATGGAAGTGGGTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256468.1	9.0e-156	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	Q9ZR08.3	4.2e-110	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230
trEMBL	A0A5P1FCT7	8.2e-151	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G03230.1	51.24	1e-112	403		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G02522	AT4G03230.1	402	184	3	22	411	609	1010	51.24	1e-112	403
Asa0G02522	AT4G27300.1	369	150	5	44	411	460	815	55.56	1e-111	399
Asa0G02522	AT1G65800.1	383	160	4	18	383	436	817	53.52	6e-110	394

Ortholog group

Species	Genes
Allium cepa	g140573.t1; g140630.t1; g183911.t1; g183912.t1; g184314.t1; g47269.t1; g491707.t1; g491709.t1
Allium fistulosum	AfisC3G04819; AfisC3G04821; AfisC3G04823; AfisC3G04827; AfisC3G04832; AfisC3G07037
Allium sativum	Asa0G02522.1; Asa2G03974.1; Asa2G04276.1; Asa2G07482.1
Arabidopsis thaliana	AT3G12000.1
Oryza sativa	LOC_Os04g54130.1; LOC_Os04g54140.1; LOC_Os04g54180.1; LOC_Os07g36544.1; LOC_Os12g15550.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	95	362	175.2	1.4e-51

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network