Detail information of Asa0G02535


Location
GeneChrStartEndStrand
Asa0G02535scaffold23176580112210-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275115.10.0e+00auxin response factor 17 isoform X1
SwissprotA2YG67.11.9e-298Auxin response factor 17
trEMBLA0A8N4IEA90.0e+00Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G37020.157.450.0 844ARF8;ATARF8auxin response factor 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag12592.t1; g310582.t1; g368194.t1; g430391.t1; g486722.t1
Allium fistulosumAfisC4G03920; AfisC5G07026; AfisC7G04154; AfisC8G04152
Allium sativumAsa0G02535.1; Asa3G01681.1; Asa4G03108.1
Arabidopsis thalianaAT1G30330.1; AT1G30330.2; AT5G37020.1; AT5G37020.2
Oryza sativaLOC_Os02g06910.1; LOC_Os04g57610.1; LOC_Os04g57610.3; LOC_Os06g46410.1; LOC_Os06g46410.2; LOC_Os12g41950.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family12722875.32.4e-21
PF06507.10Auxin_respFamily253336117.22.6e-34
PF02309.13AUX_IAAFamily72481628.11.6e-06

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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