Detail information of Asa0G02725


Location
GeneChrStartEndStrand
Asa0G02725scaffold23881728523639-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009385003.12.6e-52PREDICTED: zinc finger matrin-type protein 2
SwissprotQ96NC0.12.7e-30Zinc finger matrin-type protein 2
trEMBLA0A804LB891.8e-52U1-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G05760.177.312e-49 191C2H2 and C2HC zinc fingers superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag457124.t1
Allium fistulosumAfisC4G01251
Allium sativumAsa0G02725.1
Arabidopsis thalianaAT3G05760.1; AT3G05760.2
Oryza sativaLOC_Os03g61640.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12171.5zf-C2H2_jazFamily8210729.08.5e-07

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12848SNU23; U4/U6.U5 tri-snRNP component SNU23EC:- Spliceosomeko03040

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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