Detail information of Asa0G02805


Location
GeneChrStartEndStrand
Asa0G02805scaffold242481762020462+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264484.13.0e-59homeobox-leucine zipper protein HOX16-like
SwissprotQ6YWR4.17.6e-36OsHox16
trEMBLA0A6I9QQB81.3e-53Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G01470.152.637e-53 204ATHB-1;ATHB1;HAT5;HB-1;HD-ZIP-1homeobox 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag528284.t1
Allium fistulosumAfisC7G01177
Allium sativumAsa0G02805.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g49700.1; LOC_Os02g49700.2; LOC_Os02g49700.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain6111565.03.7e-18
PF02183.15HALZFamily11615858.64.8e-16

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.