Detail information of Asa0G04073


Location
GeneChrStartEndStrand
Asa0G04073scaffold3069627884964-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010914965.16.6e-90transcription factor NIGTH1
SwissprotQ9ZQ85.21.5e-70Protein HRS1 HOMOLOG 4
trEMBLA0A6I9QVI34.8e-90transcription factor NIGTH1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G03500.152.002e-80 296Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag333380.t1
Allium fistulosumAfisC5G01957
Allium sativumAsa0G04073.1; Asa3G04954.1
Arabidopsis thalianaAT2G03500.1
Oryza sativaLOC_Os01g08160.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain22227331.71.1e-07

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06236COL1A; collagen, type I, alphaEC:- PI3K-Akt signaling pathwayko04151
ECM-receptor interactionko04512
Focal adhesionko04510
Platelet activationko04611
Relaxin signaling pathwayko04926
Protein digestion and absorptionko04974

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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