result

Gene information

Detail information of Asa0G04446

Location

Gene	Chr	Start	End	Strand
Asa0G04446	scaffold32701	34523	35748	+

Sequences

CDS

Protein

Gene

>Asa0G04446.1
ATGAAAGCTCTTAAAGAAGACAAGCTTAGCGAATGGATCAAAAGTAAAGCTTCGGTCAATggagttatattcaaaacttcaGTTATTGGGAGTAATACTACCGTTATTACTGGAAGAGCCGGGAATAAGTTTGTACTTAGTGCTACTGATGAAATTCTAAGTGTCAAACAACCTCAATCAATTGTCAGGATTTCGGGAAAGAACAACATATTTGAACTCACTGgagaaaggtaattaaatcttGCATAATCCAACTGTAAATGTATCATTTATTTACTTGTAAGATTGGTGTCCATGGTGTGTCTAAATTTTATATCACCCACGACGACGATCAGGCTTGGCCCAGGTCCAAGGTGAACAAGATCGTCGAATTGGGCCTTGAGATTTTGATGGTTTCGAGAGCCTACCCAGATATAATTTGCATGGTAATCTCAAAGAAATGTAAAGTTTGGTTGGTAAAAATATTTTACATTGACCATAAACGATATAAGTTTAGAACTCATGtccaacaattattattttttagttctTTTGATATCTATAGCTTATAGCTAATTATGTTTTTTAGTTCTCTAATATCAACTAACCTTTACAACTTATAATTAATGGCAGCTCTAGGCTTTTTCTGATCTATATACCATAATCTTTCTAATATATTTACTAGGTATAAAATAGTAAAAGGTGCATTAATGGCATTTCTCAAACCTGAAAGCCTTCAAGAATACGTTGGTAAAATGGACACACTAGTCAAAACACAACTACTCAAAGATACAAAAAAGGACATTATAATGGCAGTGCCATTTATCAAAAAGGTCACCTTCAACTTAACATGTACTCTACTATTTAAGCTATATTATATCGAAACAAAGGAAACTCTGTTTGAGGATTTCAATCAACTCTTAAAAGGATTGTGGCCTTTtcctgttaatatatatggaacaacTTATTATAAAGCACTTCAAGCAAGAGCTAAAATTGATAAGAGGGTACAAGCTATTATGAAAAGTAGAAAAATAGAGTTGCTTGATGAGAAAATCAGTGGTAAGGATGATCTGTTAACTAGTTTGATAACATTAAAAGATGAGAACAAAGAATTGCAAAGAGATGAAGAAATTGTTGATAATTTTGTTACCTTAATGATTGCTAATCACGATACAACTGCGATTTTGTTGAGCTTGGAAGTTGGCCAAGGATACCCATACCTACGACAAAGTTCTCGAAGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010922745.1	2.0e-71	taxane 13-alpha-hydroxylase
Swissprot	Q6WG30.2	1.1e-34	Taxadiene 5-alpha hydroxylase
trEMBL	A0A8K0I529	2.8e-72	Taxane 13-alpha-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G36140.1	30.42	8e-28	120	CYP716A2	cytochrome P450, family 716, subfamily A, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G04446	AT5G36140.1	240	159	4	23	259	73	307	30.42	8e-28	120
Asa0G04446	AT5G36110.1	241	163	4	22	259	76	311	29.05	2e-26	116
Asa0G04446	AT3G19270.1	233	168	1	15	247	61	288	25.75	4e-19	91.7

Ortholog group

Species	Genes
Allium cepa	g167084.t1
Allium fistulosum	AfisC3G04322
Allium sativum	Asa0G04446.1; Asa2G07470.1; Asa3G01485.1; Asa3G02632.1; Asa6G06529.1; Asa8G00346.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	21	246	41.0	9.3e-11

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0003677	F	DNA binding
GO:0003678	F	DNA helicase activity
GO:0005506	F	iron ion binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0055114	P	oxidation-reduction process
GO:0006270	P	DNA replication initiation
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding
GO:0042555	C	MCM complex

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07437	CYP26A; cytochrome P450 family 26 subfamily A	EC:-	Retinol metabolism	ko00830

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network