result

Gene information

Detail information of Asa0G04619

Location

Gene	Chr	Start	End	Strand
Asa0G04619	scaffold3696	37984	38982	-

Sequences

CDS

>Asa0G04619.1
ATGTTACCTGGACTACCTACAAGATTTGCATTTGAAGATCTCAGGGTTGCTACTGACGACTTCTTACGAAAACTAGGAGAAGGTGGATTCGGTTCTGTTTTCGAAGGAACACTAACCGATGGCACAAAAATAGCCGTTAAAAGATTGGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATATATATTTGGTGAGACTGATTGGATTTTGTGCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCGCTTGATAAATGGATTTTCTACGAAGATCATGATTTTGTTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCGAAGGGACTGACATATTTACATCAAGATTGTAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTCTTAGACGAGAATTTCAATGCTAAAGTATCAGATTTTGGATTAGCAAAACTTATCAATCGAGATCAGAATGAAGTAGTTACAAGAATGAGAGGTACGCGTGGATATTTAGCGCCAGAATGGTTGACGTCGGTTATTACTGAAAAAGTGGACGTATTTAGCTTCGGTGTCGTAGTGCTTGAAATTGTATGTGGAAGAAGGAATTTAGATTACTCAAAAGATGAAGAAAACTTTCATTTAATTAGTCTCTTGCAAAGAAAAGTTACTGAAAATAAGCTAGCAAATGTTATAGATTGTCGTTGCACCGATATGCAGAATCACATCGATGATGTTATAGCGATTATTCATCTTGCAATGTGGTGTCTACAGAGTGATAGTAGCAAGCGACCGTTAATGTCCATGGTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGACGTGGAGGCTAATTTGGACTATAATTTCACAAACCCAACTCCTTATGTACCTAGAAATTCAAATATTGTTGAATCTTTTCAGCCAATGCCATCGACTTTATCGGGACCAAGGTGA

Protein

Gene

>Asa0G04619.1
ATGTTACCTGGACTACCTACAAGATTTGCATTTGAAGATCTCAGGGTTGCTACTGACGACTTCTTACGAAAACTAGGAGAAGGTGGATTCGGTTCTGTTTTCGAAGGAACACTAACCGATGGCACAAAAATAGCCGTTAAAAGATTGGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATATATATTTGgtgagactgattggattttgtgCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCGCTTGATAAATGGATTTTCTACGAAGATCATGATTTTGTTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCGAAGGGACTGACATATTTACATCAAGATTGTAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTCTTAGACGAGAATTTCAATGCTAAAGTATCAGATtttggattagcaaaacttatcaaTCGAGATCAGAATGAAGTAGTTACAAGAATGAGAGGTACGCGTGGATATTTAGCGCCAGAATGGTTGACGTCGGTTATTACTGAAAAAGTGGACGTATTTAGCTTCGGTGTCGTAGTGCTTGAAATTGTATGTGGAAGAAGGAATTTAGATTACTCAAAAGATGAAGAAAACTTTCATTTAATTAGTCTCTTGCAAAGAAAAGTTACTGAAAATAAGCTAGCAAATGTTATAGATTGTCGTTGCACCGATATGCAGAATCACATCGATGATGTTATAGCGATTATTCATCTTGCAATGTGGTGTCTACAGAGTGATAGTAGCAAGCGACCGTTAATGTCCATGGTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGACGTGGAGGCTAATTTGGACTATAATTTCACAAACCCAACTCCTTATGTACctagaaattcaaatattgttGAATCTTTTCAGCCAATGCCATCGACTTTATCGGGACCAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008791435.1	1.1e-130	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	Q8RWZ5.1	2.7e-91	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A8B7C466	6.4e-130	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	55.25	3e-94	342	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G04619	AT4G32300.1	295	130	2	2	294	476	770	55.25	3e-94	342
Asa0G04619	AT5G24080.1	291	143	4	6	293	115	404	49.48	7e-80	294
Asa0G04619	AT2G19130.1	315	151	5	4	314	478	780	46.98	2e-76	282

Ortholog group

Species	Genes
Allium cepa	g514606.t1
Allium fistulosum	AfisC6G00049
Allium sativum	Asa0G04617.1; Asa0G04619.1; Asa4G03169.1; Asa6G07086.1; Asa8G00374.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g23700.1; LOC_Os06g35850.1; LOC_Os06g35850.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	22	286	179.8	6e-53

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network