Detail information of Asa0G04727


Location
GeneChrStartEndStrand
Asa0G04727scaffold42491283113175-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247073.13.3e-39LOW QUALITY PROTEIN: auxin response factor 7-like
SwissprotQ6YVY0.18.9e-34Auxin response factor 7
trEMBLA0A843VPN04.6e-35Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G59750.158.044e-34 139ARF1auxin response factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag338627.t1
Allium fistulosumAfisC4G06200; AfisC6G02639
Allium sativumAsa0G01437.1; Asa0G04727.1; Asa6G04370.1; Asa6G04371.1; Asa6G04390.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily307123.15.4e-05
PF02309.13AUX_IAAFamily8211227.52.3e-06

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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