Detail information of Asa0G04987


Location
GeneChrStartEndStrand
Asa0G04987scaffold5481659617078+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008775137.18.9e-35transcription factor-like protein DPB
SwissprotQ9FNY2.12.4e-24E2F dimerization partner protein B
trEMBLA0A8B9A7Q16.4e-35transcription factor-like protein DPB

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03415.160.771e-30 129ATDPB;DPBTranscription factor DP

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag395218.t1; g395219.t1; g72762.t1
Allium fistulosumAfisC3G03580; AfisC3G07690
Allium sativumAsa0G04987.1; Asa0G04988.1; Asa2G02870.1; Asa2G06359.1; Asa6G00659.1
Arabidopsis thalianaAT5G03415.1; AT5G03415.2
Oryza sativaLOC_Os03g05760.1; LOC_Os10g30420.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04683TFDP1; transcription factor Dp-1EC:- TGF-beta signaling pathwayko04350
Cell cycleko04110

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.