result

Gene information

Detail information of Asa0G05084

Location

Gene	Chr	Start	End	Strand
Asa0G05084	scaffold5872	6897	8308	-

Sequences

CDS

>Asa0G05084.1
ATGAGTGAACAAGCCACACCTGGTTGCTCCGTGGCTTGTTTAGTAAGTGAACAAGCCATTGTTGGTTGTGCTCTAATACCAGGGTGGCACAGAATGAGCTATTATTTTAATCCCCACTCTACAAGTGTTGAGTCATCTGAGTTTCTGGACCTCATCGTACGCCTACATACTGTTGTGGGCAATGCAAAAGCTGATGATAAGCACATTGTATTTGGTAACGGGGTCACCCAACTTCTCACTGGATTGGTCATCTCACTTTCCCAACACCGAGTTTTACTGCCTAAACATATGGAGGCAAGTGTTGTCGCAGATGTCCCTTACTATCCTGTATTCAGAAAACAAACAACATATTTCCGTTACAAAGGGTACCGTTGGGCTGGAAATGCTTCAGATTACAGACGTACCCCTTCTCCTGAGAACTTCATAGAACTAGTGACTTCCCCTAATAATCCTGATGGCAACTTAAAACAACCAAAAATCAGAGGAGCTTCAGTCATTACCGATCGTGTTTACTACTGGCCTCATTATACGGCGATAAGTCATATTCCTGCCGATGACGATATCATGCTGTTTTCAATGTCCAAATTTACCGGACATGCTGGAAGCCGTTTTGGGTGGGCATTAATAAAGGATAAAGTGGTGTATAAGAAACTGTTGCAGTACATGGAGGAGAGTAGTGAGGGTACTTCACGCGATACACAGTTACGAACCTTAATCGTAATGAAGAAAATTGTAAATCAAATGGAGAATTCGCGTCTAAATAGCGATAACATCTTTAAATTTGGTTATCAAACACTGAGAAGGAGATGGAAGAAGCTAAATGAATTGGTGTCGTCTTCCGGTCGATTCTCCCTTCAAATACTAAGACCGCAAGACTGCTTTTACTTTGGAAAACATAGAGACCCCTCACCTGCTTTTGGATGGTTGAAGTGTGAATGGGGAGAAGATAATGATTGCGAAGCTGTGTTGAAAGATGGACGTATTTTAACCCAAGGTGGCGAGCTTTTTGATACAAGTAGTCGTTATGCACGCCTGAGCTTAATCAAGACTGAGGACGATTTTGATCAAATGATGGAGAAATTGGAGCCGCTTATTACCGAGAAAAGGACTTAA

Protein

Gene

>Asa0G05084.1
atgagtgaacaagccacacctggttgctccgtggcttgtttagtaagtgaacaagccattgttggttgtgctctaatacCAGGGTGGCACAGAATGAGCTATTATTTTAATCCCCACTCTACAAGTGTTGAGTCATCTGAGTTTCTGGACCTCATCGTACGCCTACATACTGTTGTGGGCAATGCAAAAGCTGATGATAAGCACATTGTATTTGGTAACGGGGTCACCCAACTTCTCACTGGATTGGTCATCTCACTTTCCCAACACCGAGTTTTACTGCCTAAACATATGGAGGCAAGTGTTGTCGCAGATGTCCCTTACTATCCTGTAAGTTCATTGCCAGACAACATTGTATGTTTTGTGAAGTGAAGTAACTAAACATATGCATGCTTTGTAGCATGTAATTTGTTAAGTGAAACCACTGAAACGATTATGATCGCATGTACAGGTATTCAGAAAACAAACAACATATTTCCGTTACAAAGGGTACCGTTGGGCTGGAAATGCTTCAGATTACAGACGTACCCCTTCTCCTGAGAACTTCATAGAACTAGTGACTTCCCCTAATAATCCTGATGGCAACTTAAAACAACCAAAAATCAGAGGAGCTTCAGTCATTACCGATCGTGTTTACTACTGGCCTCATTATACGGCGATAAGTCATATTCCTGCCGATGACGATATCATGCTGTTTTCAATGTCCAAATTTACCGGACATGCTGGAAGCCGTTTTGGGTATGCTTGCCAACTCGTGCATTAGTAGTAGAACCATATATTTGCTAACTGTTCTCGAAAGATATAACCACGTGTATACTTGCAGGTGGGCATTAATAAAGGATAAAGTGGTGTATAAGAAACTGTTGCAGTACATGGAGGAGAGTAGTGAGGGTACTTCACGCGATACACAGTTACGAACCTTAATCGTAATGAAGAAAATTGTAAATCAAATGGAGAATTCGCGTCTAAATAGCGATAACATCTTTAAATTTGGTTATCAAACACTGAGAAGGAGATGGAAGAAGCTAAATGAATTGGTGTCGTCTTCCGGTCGATTCTCCCTTCAAATACTAAGACCGCAAGACTGCTTTTACTTTGGAAAACATAGAGACCCCTCACCTGGTTTGTATATCAATTCAGATGGACATGTCTAAAACTTTAAGTATTGATTTGTATGTCATAACgtaaatctctttccttttattgAATGTGCAGCTTTTGGATGGTTGAAGTGTGAATGGGGAGAAGATAATGATTGCGAAGCTGTGTTGAAAGATGGACGTATTTTAACCCAAGGTGGCGAGCTTTTTGATACAAGTAGTCGTTATGCACGCCTGAGCTTAATCAAGACTGAGGACGATTTTGATCAAATGATGGAGAAATTGGAGCCGCTTATTACCGAGAAAAGGACTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	AZG03003.1	1.4e-120	alliinase
Swissprot	P31756.1	1.5e-106	Cysteine sulphoxide lyase
trEMBL	A0A3G8G7W1	1.0e-120	Alliinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34040.1	44.80	2e-84	309		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G05084	AT1G34040.1	346	174	6	28	368	117	450	44.80	2e-84	309
Asa0G05084	AT1G34060.1	355	186	7	18	365	108	449	41.97	6e-81	297
Asa0G05084	AT1G23320.1	346	193	10	25	364	50	380	38.15	8e-66	247

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04864.10	Alliinase_C	Domain	22	364	477.8	1.7e-143

Gene Ontology

Accession	Ontology	Name
GO:0016846	F	carbon-sulfur lyase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14548	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4	EC:-	Ribosome biogenesis in eukaryotes	ko03008

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network