Detail information of Asa0G05297


Location
GeneChrStartEndStrand
Asa0G05297scaffold7057124897131885-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF0930119.12.3e-34hypothetical protein E2562_030292
SwissprotQ7XJE6.11.0e-26Protein LSD ONE LIKE 3
trEMBLA0A6G1EZV61.7e-34zf-LSD1 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G02170.172.577e-37 149ATMC1;AtMCP1b;ATMCPB1;LOL3;MC1;MCP1bmetacaspase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag195028.t1
Allium fistulosumAfisC2G04755; AfisC7G00358
Allium sativumAsa0G05297.1; Asa1G04436.1; Asa7G07659.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain22327.33.1e-06
PF00656.19Peptidase_C14Domain1610244.91.3e-11

Gene Ontology
AccessionOntologyName
GO:0004197Fcysteine-type endopeptidase activity
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0006508Pproteolysis
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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