result

Gene information

Detail information of Asa0G05468

Location

Gene	Chr	Start	End	Strand
Asa0G05468	scaffold7922	16927	19400	+

Sequences

CDS

>Asa0G05468.1
ATGATGAAAACGAAAACAGAGCTTCCTAACAATGCAGCATGTGCTGCTGATGTTTTAATCTGTACTTCCAACGGCTTTAAAATCCCCGCTCACTCTACTGTTTTGGCTTCAGAATCGAAGGTGTTTGAAGAAATAATTGAAAGGAGAAGAAGAAAAGGGAAGATGGAAAAAGATATTGCTGTTTTGGGTGTTCCTTCTCCTGCTGTTGCTGCTTTTCTTCTTTTGCTTCATTCTAGAAGATCTTGTGAAGAAGTGGAGCGAACCGAAATGATGGACAAATACGGGATGCATCTAATGGTGCTATCACATGTATATCAAGTGCATTGGCTTAAGAAAATATGTGAAGTGGAACTAGCTTTACGACTAACTGTTGACTCAGTAGTCGATTTTCTTTTGCTGTCAAGGCAGTGCGATATGCCTAAACTCTACTTGCAGTGCATGAAGTTGCTTCAAAAAGATTTCCCTACTGTTGACAAAACCGAAGCCTGGGGTTTTCTTCAAGAAAACGACCCTTGGTTTGAGCTTGAAATCCTTCAATATCTCGAAGCCCAGGACTTGAAGGAAAAGAGGAGGAAGAAGAAGATGGAAGAGCAAAAGACATATCAGCAACTAAGTGAAGCAATGGAATGCGTGCAGCGCATATTCTCTGAAGGATGCGCTCATATTGGCCCTTGCAATAAATGTAATCCATGGAGGAAGATGGAGTCATGCCCAAACTACACCACTTGTCAAGCTATTCAGCTCTTGCTTCAGCACTTGGCTTTTTGTACATCTAAGAGGTCGACCTGTTATAGATGTCGTAGAGTGTGGGACTTGCTTCGCCTGCATTCGTATGTGTGCAACATGGATGATCATCAATGCAGGGTTCCTCTGTGCATGGAATTTAAGAGAAGGGAGCAAGTAGGCAGAAACGTGGATAGGGAGAAATGGAAGGTTCTGGCGAAGAAAGTTGCCTCCGTCTATGTGGTGTCTTTTATAGCCAAGAGGAGAAAACACAAAACAGGGTGTGATGAAGGAACGCTATCATAA

Protein

Gene

>Asa0G05468.1
ATGATGAAAACGAAAACAGAGCTTCCTAACAATGCAGCATGTGCTGCTGATGTTTTAATCTGTACTTCCAACGGCTTTAAAATCCCCGCTCACTCTACTGTTTTGGTAGGACATTTTTTGTTGAATTCTTCAACTGTTTTATGTTtatgattaatcttgttttaatttgaTATGTATAGAATAGCGTCAATGTATTATATCTCATGGGTTTCGTTTTGCCTATGTAAAGGCTTCAGAATCGAAGGTGTTTGAAGAAATAAttgaaaggagaagaagaaaagggaagatGGAAAAAGATATTGCTGTTTTGGGTGTTCCTTCTCCTGCTGTTGctgcttttcttcttttgcttcatTCTAGAAGGTTCCTTTCCTCACCccttccttatttccttcttttataAGAACAGCTTCTAATGAATTGTAAAACTTGCCACAGATTGTTATATGCTCGAAAATAGTATTGGTTCAACTTTCATACTTAGGAGTTTCCTTACTCATAAAATATCTATTTTGTTATAAGACTGAAAGCAAAACATTTGATAATCTTAGGCCAAAAGTATATAATACTCCCTGTTTGATTTATGGAGGATAACTTTCATTCGTTTACATTCCGTTAGCTATCCAAATTACAAGGAAATCATCGAAGTAAAAGccaaattgttttgaaacctattttgaataaaaaatgatACACTTGACATGGTTATTAAATTGCAGGAAATATATGTTGCTTTCAAACACTAGTTGTGCTTGTTTAATTAGCATGCTTTGCATGTTTcactatttaattttgaaaacgCGTTTAATGTTGATAGTTCAAAATTCATGGGAAGGAATCAAGTTTGTCTACAAGTGACAATTAAACAGTTGTCATGCCTGtggaatattttatttccttggTCCAAAGATACTGCTAGGggcaattttcctttttattgataataattaaCCTTTGACAACTCAAGTCAGCCTCTTCCCACTCATTCAATACACGTTCAACTCACCAATAAATAAAGTTTGCAGGAGAAATGCTAAGCAGTTAAGCACGCTTGTTTAAATTTAGTGTGCATGGCTAGTTATAGCAAAATTGTTTGGTCACATATTCAAATTCCTTGACCAGCACATCTACTGTTGTCTCAGTGGTTAGGCACATCGATTCTGATGCAAAAAATTTAGATTCAAAATTTATGTATAGTGATTCAAACTTGTATTAGTTTGTTAGTATGTAACTGTGACATACGACCTATATAAGACTTATATACAATTAACAgttgagataaaaatgaaaatcataaaTAATTAGCACATAATTTACACCAATAAAAGGGCAAGTATCATGCCCAACTCCTGAAAAGGAGACTGAGTAATATATGTACAATTTTGCATTTTGCCTTTTGAAGGAATCAATCTCTTTCGTTTTTTCTAATGTGGTACTCGTTAGTACATTAATTTTGCAATAATTAAATCTGTATAAATGTTATGCAGATCTTGTGAAGAAGTGGAGCGAACCGAAATGATGGACAAATACGGGATGCATCTAATGGTGCTATCACATGTATATCAAGTGCATTGGCTTAAGAAAATATGTGAAGTGGAACTAGCTTTACGACTAACTGTTGACTCAGTAGTCGATTTTCTTTTGCTGTCAAGGCAGTGCGATATGCCTAAACTCTACTTGCAGTGCATGAAGTTGCTTCAAAAAGATTTCCCTACTGTTGACAAAACCGAAGCCTGGGGTTTTCTTCAAGAAAACGACCCTTGGTTTGAGCTTGAAATCCTTCAATATCTCGAAGCCCAGGACTTGGTATGATAACCATTTATCAAACATTGTGTACTCGGTATGATATTCTCTTTGATCTCGATAGTtactgaaaagaattgatttgaaattcagaaggaaaagaggaggaagaagaagatggaagagCAAAAGACATATCAGCAACTAAGTGAAGCAATGGAATGCGTGCAGCGCATATTCTCTGAAGGATGCGCTCATATTGGCCCTTGCAATAAATGTAATCCATGGAGGAAGATGGAGTCATGCCCAAACTACACCACTTGTCAAGCTATTCAGCTCTTGCTTCAGCACTTGGCTTTTTGTACATCTAAGAGGTCGACCTGTTATAGATGTCGTAGAGTGTGGGACTTGCTTCGCCTGCATTCGTATGTGTGCAACATGGATGATCATCAATGCAGGGTTCCTCTGTGCATGTGAGTTATATTTCTTGATGTATATGTACTTAACGATTGATCAGATTAAGAATGCATGCACTTGCGGGTTTATTTAAGACATTATAATTAATGTGTGGAATTTGTAGGGAATTTAAGAGAAGGGAGCAAGTAGGCAGAAACGTGGATAGGGAGAAATGGAAGGTTCTGGCGAAGAAAGTTGCCTCCGTCTATGTGGTGTCTTTTATAGCCAAGAGGAGAAAACACAAAACAGGGTGTGATGAAGGAACGCTATCATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263843.1	1.7e-107	BTB/POZ and TAZ domain-containing protein 1-like
Swissprot	Q9FMK7.1	2.3e-61	BTB and TAZ domain protein 1
trEMBL	A0A5P1F332	3.3e-105	TAZ-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G48360.1	41.00	2e-65	246	ATBT2;BT2	BTB and TAZ domain protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G05468	AT5G63160.1	313	158	6	16	319	25	331	44.73	1e-65	246
Asa0G05468	AT3G48360.1	339	182	6	7	333	25	357	41.00	2e-65	246
Asa0G05468	AT5G67480.1	309	183	7	11	317	55	354	37.22	2e-49	193

Ortholog group

Species	Genes
Allium cepa	g179623.t1; g179637.t1; g179638.t1; g179642.t1; g243185.t1; g356287.t1; g94355.t1; g94366.t1
Allium fistulosum	AfisC1G04563; AfisC1G04564; AfisC1G04565; AfisC1G04566; AfisC4G05540; AfisC4G05545; AfisC8G05424
Allium sativum	Asa0G03826.1; Asa0G03827.1; Asa0G04282.1; Asa0G05468.1; Asa1G00398.1; Asa1G01819.1; Asa1G04826.1; Asa4G03524.1; Asa7G03957.1; Asa7G03958.1; Asa7G04378.1; Asa7G04379.1; Asa7G04398.1; Asa7G04399.1; Asa7G04401.1; Asa7G04402.1; Asa7G04403.1
Arabidopsis thaliana	AT3G48360.1; AT5G63160.1
Oryza sativa	LOC_Os01g68020.1; LOC_Os02g38320.1; LOC_Os04g40630.1; LOC_Os04g40630.2; LOC_Os04g40630.3; LOC_Os04g40630.4

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	15	118	31.1	2e-07
PF02135.13	zf-TAZ	Family	220	292	28.2	1.9e-06

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003712	F	transcription cofactor activity
GO:0004402	F	histone acetyltransferase activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00517	CYP81F; indol-3-yl-methylglucosinolate hydroxylase	EC:1.14.-.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network