result

Gene information

Detail information of Asa0G05685

Location

Gene	Chr	Start	End	Strand
Asa0G05685	scaffold891	11454	13439	-

Sequences

CDS

>Asa0G05685.1
ATGGTAGCGCTTTTAGTAGCTGGAGGTGTTATATACCTCTTGCTTCGTAACATTAATGTCAAGAAGAAGAGGAAGGCTGAGGAAGAAAACAAGTGGGCAAAGAATTTGAAGGGTGTCAAAAGTGCCAAGGTTTCAATGTTCGAAAGCTCAGTTTCGAAAATGAAACTAAGTGATCTCCTAGCAGCGACCAATGACTTCAACAAAGAACATGTCATAGCAACTGGTAGAACTGGAACCATGTACAAAGCAGTGCTACCCGATAAAACTATACTTGCCATAAAAAGGCTTCAAGATTCTCACCACTCAGAGACTCAATTCGCATCAGAGATGGCAACACTAGGAATGGTACGGCATAAAAACTTAGTACACCTCATGGGATTTTGTACTGCCAAAAAAGAGCGCCTTTTGGTGTACAAACACATGCCAAATGGCAATCTCTTCGATTCCTTGCACCCAATTGAGGGAGACGTGAAATTAAAAGACTGGCCAACAAGGCTTAAGATAAGCATTGGAGCAGCAAGAGGCCTAGCTTGGCTTCACCATATCTGTAACCCGAGAATCCTTCATTGTTACATTAGTTCAAAATGCATACTTCTAGATGAAGACTACGAAGCTAAAATATCGGATTTTGGGCTTGCAAGAGTTATGAACCCAGTTTATAGCCATTTAGGTAATTTTTTTAATGAAGAATTCGGCGATTTGGGCTATGTTGCTCCTGAATGTGCACGTACTTCAGTCGCAACTCCAAAAAGAGATGTGTATAGTTTTGGAGTAGTGCTTCTTGAATTGGTTACTGGTGAAAAACCTACTCATGTGTCTAACGCACCTAAGAGTTTTAAAGGGGGTTTAGTTGATTACATCAATTATGTATCGAATATGTCTATTCTTCAAAATGCGGTGGATAGAAGTTTGATTGGTCGTGGATTTGACAGTGAGATTCTTCAAGTGATGAAAGTTGGATTTAACTGTGTTATGCCTACTCCAAAAGAGCGGCCTACCATGTTTGAAGTGTATCAACTTTTAAGAGCTATAGGTGAGAAATATCAATTTAGCGTGGATGATGATGCATTGATGCAACCCGATAGCAACACTGCTGAGTTAATGGATGAGCTTATCGTCGTAAAATGA

Protein

Gene

>Asa0G05685.1
ATGGTAGCGCTTTTAGTAGCTGGAGGTGTTATATACCTCTTGCTTCGTAACATTAATGTcaagaagaagaggaaggctgaGGAAGAAAACAAGTGGGCAAAGAATTTGAAGGGTGTCAAAAGTGCCAAGGCAAGTTTGACTTATTTTCCTGATTCAATCAAAATGATTTTCTTTCCCTAATAAGTTTCACGAGCAAGTTTAGTGCTTTTATCTTGGTTAAACCACAACTTCTGCTATTAGTCTTTGATCATGTTCATAGACTATGAATCTATTTTGGGTTTATTATCTAAAAAAATATCTCATTTACACTGTTTATGCTCCCTAGTACAATAATATATCAACCGAATGAATTTGAACATTCATAAGCCATAATTATATAGATTATTACAAGAAATTCTTAAAGGGATATTTTGGATCACATCactgttaaaattttaaatttggccctCATCCTTCCGTTAATGCTATCAACATCCCAGTTTTTATATTTGTAGAATTGTAGTTGGAAATGATGTAAATTTCGTTTTCAATCAATATTGGATTTAATATTTTATGAATGCTAATCAAATGTTCTAAAAAAGATACTCAAATTTCAAGATAATATGCTGTCACTGCAATATTTGCAATGCAAAATGTTCAGAATTTTCCATTGCGAAATATTAGCAGTGCAGAATTTTATTGGGCAATTTATTGGCTAATATTGTTTAATAttagaaatattggaaaataaaatatcaacatatggTTTCAAAATTATGAGCTATGATTTTAAATGGATGATGACCAGTTGTAAACATATTTGTGATGGAAGAATATGCATTAAAAAAACAGTGATCTAGGAAATATAAGCATAATGACAGGAACACGAAAAATAGTTTTCTTCAAAATGAGAATGTGTACCAAAATTTCTTTTCTGAAACAGGAAATGCAAATGATTCTGAGTACATAAATTTTAAGACGCTATTATTGAAAAATGTCTCTTTTCAGGTTTCAATGTTCGAAAGCTCAGTTTCGAAAATGAAACTAAGTGATCTCCTAGCAGCGACCAATGACTTCAACAAAGAACATGTCATAGCAACTGGTAGAACTGGAACCATGTACAAAGCAGTGCTACCCGATAAAACTATACTTGCCATAAAAAGGCTTCAAGATTCTCACCACTCAGAGACTCAATTCGCATCAGAGATGGCAACACTAGGAATGGTACGGCATAAAAACTTAGTACACCTCATGGGATTTTGTACTGCCAAAAAAGAGCGCCTTTTGGTGTACAAACACATGCCAAATGGCAATCTCTTCGATTCCTTGCACCCAATTGAGGGAGACGTGAAATTAAAAGACTGGCCAACAAGGCTTAAGATAAGCATTGGAGCAGCAAGAGGCCTAGCTTGGCTTCACCATATCTGTAACCCGAGAATCCTTCATTGTTACATTAGTTCAAAATGCATACTTCTAGATGAAGACTACGAAGCTAAAATATCGGATTTTGGGCTTGCAAGAGTTATGAACCCAGTTTATAGCCATTTAGGTAATTTTTTTAATGAAGAATTCGGCGATTTGGGCTATGTTGCTCCTGAATGTGCACGTACTTCAGTCGCAACTCCAAAAAGAGATGTGTATAGTTTTGGAGTAGTGCTTCTTGAATTGGTTACTGGTGAAAAACCTACTCATGTGTCTAACGCACCTAAGAGTTTTAAAGGGGGTTTAGTTGATTACATCAATTATGTATCGAATATGTCTATTCTTCAAAATGCGGTGGATAGAAGTTTGATTGGTCGTGGATTTGACAGTGAGATTCTTCaagtgatgaaagttggatttaaCTGTGTTATGCCTACTCCAAAAGAGCGGCCTACCATGTTTGAAGTGTATCAACTTTTAAGAGCTATAGGTGAGAAATATCAATTTAGCGTGGATGATGATGCATTGATGCAACCCGATAGCAACACTGCTGAGTTAATGGATGAGCTTATCGTCGTAAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245909.1	1.2e-154	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
Swissprot	Q9ASS4.1	1.7e-121	Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
trEMBL	A0A5P1E791	8.5e-155	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G48380.1	59.42	1e-128	456	BIR1	BAK1-interacting receptor-like kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G05685	AT5G48380.1	382	146	4	3	375	239	620	59.42	1e-128	456
Asa0G05685	AT1G27190.1	356	183	2	2	351	231	586	46.91	9e-90	327
Asa0G05685	AT1G69990.1	327	173	4	25	350	254	572	44.34	4e-82	301

Ortholog group

Species	Genes
Allium cepa	g230123.t1
Allium fistulosum	AfisC4G05644
Allium sativum	Asa0G05685.1; Asa1G04853.1; Asa4G03776.1
Arabidopsis thaliana	AT5G48380.1
Oryza sativa	LOC_Os01g66820.1; LOC_Os05g34270.1; LOC_Os11g14420.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	67	339	127.6	4.7e-37

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network