result

Gene information

Detail information of Asa0G05746

Location

Gene	Chr	Start	End	Strand
Asa0G05746	scaffold9091	61838	64711	-

Sequences

CDS

Protein

Gene

>Asa0G05746.1
ATGGAAGATCAAGACCTGCAAAATCAAGCCAGCAGTAACGACTTGCCAAGTGAGATAACCAGAGTCTGCACGAAATGCAATACTACTAAGACATCCTTATGGAGAGGTGGACCTTTAGGCCCAAAGGTATTTGAtaatttcatttctgaaataagTTAATAAACAACCTTCATAAATCATATattttgctttgaaataaattgatacATTCTTACGTCCCTTCCAATTTCTTTCTATAGAACAtatcttcatttttagaaaaataggTCAATGTGTGTTTGGATAATTTTACTAACCTTAGAATGTggtcatttatcattttccataacCCATAACTAATATAATACATTTagcaactcttagatttaaaatataaaatataaagaattatatgaAGAAAAAATGTAGAAAATAGTTTCTAAAAGAGAGAATGTAAAACAAATGGGTTTTAGAAAGAATAATACGTCACTAATTTCCAAATGTCTTTTATTGCAGCTGTGTAATGCATGTGGAATAAGGAAAATGAAAGCAAGACGTGCAATGAGGTTAGCTGCTGATGCAGATCATACTTTTCCTTTCAAAAAACAGTTCAGGATGAACTATGTTCCAAGATGTAAACTCAACTCAGTTGAGACCTCATCCGATACAAAATACAGTGCGAAAATCCTAGAGACAAGATTTGACTAAAATTGCAGGTTCGTAACCTTAGGTATATGACAAGTTAACCGTTAATGCATCAACACATTTCCCTATAGAAGTTTGTTTGACATGAAGGTTCTATATGTGTTAATGAATtataatgatgattttctctcatCCATTGATGCTGGAAATTTACAGTTCTATGCTAGTTTAATAAATTAGAGGCAACGTTCTTATAAAGAAGCGAAATAGATTTATAACTGTCACCTGTCATCACTTCCTACGATACCTTTACATTCTAGTGGAGCAGCCAATGCTCCAATTTAATGGCATTGCCAGAGGCATCTATCACCATGTGTTCCTTCACATGTAAGCGGCTAGCAGCCTTTAGGACCTAAAAACAACATATAAACACACccaaataaatatggaaatgaacTTGCCATGAAACAAAAAGAGGAATAAACTAGACTTGCATAAAGAACTTGCTATCAATTTATGATGCATAAAATGTTGACATACTAATTATTACATGGTAAAAATAGGTCATAGAGATGTATTACTTAAAGAACGGTAAGCTATTCAGGGAAAAGGTGTTGCATAAAATGAGCAGTAAACATTTGAACATAGTGCAACATTGCAGCCTTGTGGATCCACATTTAAATAGTCAAATATCATGTAAGGAATTGTCATGTTCTTCTATCAGTATTTGGCCTTGCTATATCTGCTAAGTACAGATCAAGTTTCTCTGAATTAGCATGTTCTTCTATCAGTAAGTGTCAATCACAGATGCCAATGCAACGAATATGCATTTTCATGAAGTACTTATTACCATTTTATTTCACTAATACTATTCACTAAAGCAACTAAAGGAAACTGAATAGTTACCCCAATTTAATATGTTCTTATAATTTATCCACAAAGAAAAACTGCTTCGCATAGTAGCTGCTCTGTACCAGCAGCCTAGGTACATACAACACAAAATAGCGCAACTAAGGAATAAACAATAATGAGCTAGTccacttttacttttattttcatccTTTGAGAGTTTAAAACAATAGTGAGCTACATGaatcaataataataaaatcagtccttaacataaaaatgaatattagttataaacaacaaatgtaataataataaaattagtcTATGTACcttgaacaaaaagaaaaaaagtagGCCAACCACAAAAGAAATGACTAGAATTACCTCATAGGGCATGGGCAAAGACAGGAAGGTTGTCGCACTATCACCATGTTCAGTTTTAAATATTTCCTTCCTAATTCAATTTGAAGAAACAACAGGAACCTACATCAATTGCCTTCCATTGCACGTtgcatttttattttggaaaaaagaaaaaaaaaataagataagacaaacaagcttgaaaataaaaaattataccaAGTTAGCCCCTGCATGTCTTTGCATTACCCGGTTCCAGTGATCCTTGAAGCACAAAATTTCTGCTCCTTGAAGAGCCATAGGAAACCACTGATCCCAACAAATGGCTGTCATTTGATTAAGAAAATTTTACCATAAGCATTATGCTAATTTAAGTCAGTTTAGCATGACAAAAGTCATATATTTAAGTTAGAGAAGGACCCAGGCGCTACCATGTTACTTGCTGAATTAGCTTTGGACGCCAGTCTGCCAGATGGTGTCCTAAACAATGTTCATGGTACCCACGACACTGTTAATAATATATGTGATCATGAGGACATCAGAGCTATATAATTTGTTGGTTCAAATCCAGTTGGAATGCACATATATTCAAGAGCATCAGCTAAGGGTAAACGAGTTCAGTCAAACATGGGTGTAAAAAGCCATGCAATCATCATGACTGGTGCAAGCGTAGAGGCAACAATAAATTCATTGGTCGCTGCTGGTTCTGGTGCTCAAAGGTGCATGTCACTTAGTACAGCTGTTTTTGTTGATGGCTCAAAACAATGGGAGGATGAATTAATAAAGCGAGCCAAATCACTTAAAGTAAATGCAGGCGGTGAGCCTGGAACTAACCTTGTTCCACTGATTAATAAGCAGTCAAAGTATAGCATTTGCAGCTTGGTACAGACCGGCGTTAAAAGCAATGCTAGGCTTTTACTTGATGAAAGAAATATTGAGTTTCCTGGATACGAGAGTGGTAATTCTGTTGGCCCAACGATTTTATGTGATGTTACGGATGACATAGAATGTTACAAGGAGGAAATTTCGGCCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257246.1	3.1e-53	methylmalonate-semialdehyde dehydrogenase
Swissprot	Q0WM29.2	2.6e-49	Aldehyde dehydrogenase family 6 member B2
trEMBL	A0A5P1FAI8	2.2e-53	methylmalonate-semialdehyde dehydrogenase (CoA acylating)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G14170.1	59.87	3e-48	188	ALDH6B2	aldehyde dehydrogenase 6B2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa0G05746	AT2G14170.1	157	61	1	101	255	336	492	59.87	3e-48	188
Asa0G05746	AT2G14170.3	157	61	1	101	255	336	492	59.87	4e-48	188
Asa0G05746	AT2G14170.2	157	61	1	101	255	227	383	59.87	4e-48	187

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00320.24	GATA	Domain	23	51	47.0	1.3e-12
PF00171.19	Aldedh	Family	100	255	84.8	4.2e-24

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0004491	F	methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00140	mmsA, iolA, ALDH6A1; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase	EC:1.2.1.18 1.2.1.27	Propanoate metabolism	ko00640
			Inositol phosphate metabolism	ko00562
			Valine, leucine and isoleucine degradation	ko00280
			beta-Alanine metabolism	ko00410

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network