Detail information of Asa0G05836


Location
GeneChrStartEndStrand
Asa0G05836scaffold94072669528704-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008788860.11.4e-107SWI/SNF complex component SNF12 homolog
SwissprotQ9FMT4.13.3e-93SWI/SNF complex component SNF12 homolog
trEMBLA0A8B7C0411.0e-107SWI/SNF complex component SNF12 homolog

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G14170.171.172e-97 351CHC1SWIB/MDM2 domain superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag84319.t1
Allium fistulosumAfisC2G03489
Allium sativumAsa0G05836.1
Arabidopsis thalianaAT3G01890.1; AT5G14170.1
Oryza sativaLOC_Os04g31320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02201.15SWIBDomain77872.41.9e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11650SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily DEC:- Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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