Detail information of Asa0G05913


Location
GeneChrStartEndStrand
Asa0G05913scaffold97944325129-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020574740.12.0e-19homeobox-leucine zipper protein HOX12-like
SwissprotO23208.31.5e-16Homeodomain transcription factor ATHB-40
trEMBLA0A843V1881.4e-19Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G18550.138.153e-2094.7ATHB21;HB-2;HB21homeobox protein 21

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag304900.t1; g40933.t1; g463158.t1; g495598.t1; g518599.t1
Allium fistulosumAfisC3G02091; AfisC3G02097
Allium sativumAsa0G02720.1; Asa0G03165.1; Asa0G05429.1; Asa0G05913.1; Asa2G01739.1; Asa2G01744.1; Asa2G01892.1; Asa8G02397.1
Arabidopsis thalianaAT2G18550.1; AT4G36740.1; AT5G66700.1
Oryza sativaLOC_Os07g39320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain338755.43.5e-15

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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