Detail information of Asa1G00060


Location
GeneChrStartEndStrand
Asa1G00060chr11199832612050878-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_019701724.24.1e-135transcription factor TGA2.3
SwissprotQ6IVC3.14.2e-121bZIP transcription factor 28
trEMBLA0A6J0PBC02.9e-135transcription factor TGA2.3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G12250.172.702e-136 482BZIP45;TGA6TGACG motif-binding factor 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag168250.t1; g335984.t1; g60786.t1; g72979.t1
Allium fistulosumAfisC2G06918; AfisC5G01010; AfisC7G04286; AfisC8G05968
Allium sativumAsa1G00060.1; Asa3G01569.1; Asa4G02800.1
Arabidopsis thalianaAT1G68640.1; AT3G12250.1; AT3G12250.2; AT3G12250.3; AT3G12250.4; AT3G12250.5; AT5G06950.1; AT5G06950.2; AT5G06950.3; AT5G06950.4; AT5G06960.1; AT5G06960.2
Oryza sativaLOC_Os01g17260.1; LOC_Os01g17260.2; LOC_Os01g59350.1; LOC_Os03g20310.1; LOC_Os03g20310.2; LOC_Os03g20310.3; LOC_Os03g20310.4; LOC_Os05g41280.1; LOC_Os06g15480.1; LOC_Os06g15480.2; LOC_Os07g48820.1; LOC_Os07g48820.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00170.18bZIP_1Family13917929.36e-07
PF14144.3DOG1Family221296107.82.1e-31

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006351Ptranscription, DNA-templated
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14431TGA; transcription factor TGAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.