result

Gene information

Detail information of Asa1G00253

Location

Gene	Chr	Start	End	Strand
Asa1G00253	chr1	59719929	59721684	-

Sequences

CDS

>Asa1G00253.1
ATGGATTACATGAGTTTGTACTTGTTGGTTCTCATAATCACCATCACATTCATCCTGAAAAAACTAAAAAAACGGCGCAAGTACAAACTGCCTCCAGGCCCATCTCCATACCCGATCATCGGAAACCTGAACCTGATAGGTTCCCTTCCCCATCGATCAGTCCACCATCTCTCGCAAAAATACGGACACATAATGCAACTTCAATTCGGTTCATTTCCAGTAGTAGTCGGCTCCTCGGTGGAAACAGCTCGTTTCTTCTTAAAAACCCACGACATCTCATTCGTGGATCGTCCAAACACAGCGGCTGGGAAATACACAACGTACAACAACTCAGATATAACGTGGTCACCCTATGGAGCATACTGGCGCCAAGCGCGTAAAATGTGTGCGGTGGAGCTCTTCAGCATGAAGCGTCTCGAATCGTACGAGTACATCCGGGTCGAAGAGCTCGGGAACATGCTGAAGAACCTCTACCATCATTCTCAAACTAAAATAGTTTTGAAGGATTTTCTATCCACGCTGAGTTTGAACGTGATAAGCAGGATGGTTCTTGGAAAGAAGTACGTGCAGGATGAAGAAGAAGAGTTCAAGAGAATGATCGAAGAGCTGTTCTTGCTTAGCGGAGTCTTGAACATCGGAGACTCCATTCCTTGGCTAAACTTCTTGGATTTGCAAGGCTACATTAAAAGGATGAAGGCGTTGAGCAAGAAATTGGATAGGTTTTTAGAACATGTTTTGGACGAGCATGTGGAACGCAGGAAAGAGTGTGGTGACAAGTTTGTCGCCAAGGATATGGTTGACGTCTTGCTTCAAATTGCAGATGATCCTACTTTGGATACCAAGCTAAGTAGGGATGGCGTCAAAGCTTTTACTCAGGACTTGATCGCGGGGGGAACGGAGAGCTCGGCAGTGACGGTTGAATGGGCCATCTCGAACATTCTAAAACGGCCATACATCTTCGAAAAGGCAACTGAAGAGCTGGATCGGGTTATTGGGAAGAACAGGTGGGTGAAGGAGAATGATTTGGCACAGCTTCCGTATATAGAATCCATTGTGAAGGAAACGATGAGGATGCACCCGGTTGCACCAATGCTTTCACCTAGACTGTCCCGTGAGGACACCACGTTTGATGGCTATGATATTCCTGCAGGTACGAGGGTGTTGGTGCATGTATGGACGATTGGAAGAGACCCGAAGATATGGGAGGAGCCGAATGAATTTAAACCGGAAAGATTCATGGGGAAGAAGATCGATGTAGGAGGCAATGACTTTGAGCTGTTACCATTTGGTGCAGGGAGAAGAATGTGCCCTGGTTACAGTTTGGGTTTGAAGGTGATACAGATGAGTTTGGCTAACATGTTGCATGGGTTTAAGTGGACATTGCCTGAGGGAATGAGCAAGGAAGAGCTGAGCATGGAGGAGATATTTGGATTGTCTACTCCCAAGAAAGAGCCCTTGCAGGTGGTGGTTGAGCCCAGGCTAGACAATGAGCTTTATGATCAACTCTCCGATCTTTCTGGCAATTCATTGAAGTGA

Protein

Gene

>Asa1G00253.1
ATGGATTACATGAGTTTGTACTTGTTGGTTCTCATAATCACCATCACATTCATCCTGAAAAAACTAAAAAAACGGCGCAAGTACAAACTGCCTCCAGGCCCATCTCCATACCCGATCATCGGAAACCTGAACCTGATAGGTTCCCTTCCCCATCGATCAGTCCACCATCTCTCGCAAAAATACGGACACATAATGCAACTTCAATTCGGTTCATTTCCAGTAGTAGTCGGCTCCTCGGTGGAAACAGCTCGTTTCTTCTTAAAAACCCACGACATCTCATTCGTGGATCGTCCAAACACAGCGGCTGGGAAATACACAACGTACAACAACTCAGATATAACGTGGTCACCCTATGGAGCATACTGGCGCCAAGCGCGTAAAATGTGTGCGGTGGAGCTCTTCAGCATGAAGCGTCTCGAATCGTACGAGTACATCCGGGTCGAAGAGCTCGGGAACATGCTGAAGAACCTCTACCATCATTCTCAAACTAAAATAGTTTTGAAGGATTTTCTATCCACGCTGAGTTTGAACGTGATAAGCAGGATGGTTCTTGGAAAGAAGTACGTGCAGGAtgaagaagaagagttcaagagaATGATCGAAGAGCTGTTCTTGCTTAGCGGAGTCTTGAACATCGGAGACTCCATTCCTTGGCTAAACTTCTTGGATTTGCAAGGCTACATTAAAAGGATGAAGGCGTTGAGCAAGAAATTGGATAGGTTTTTAGAACATGTTTTGGACGAGCATGTGGAACGCAGGAAAGAGTGTGGTGACAAGTTTGTCGCCAAGGATATGGTTGACGTCTTGCTTCAAATTGCAGATGATCCTACTTTGGATACCAAGCTAAGTAGGGATGGCGTCAAAGCTTTTACTCAGGTTTTCTTtcatacatatacgtatatataactGTGTGTTATGAATATTAGACGCAGAGCTACACTTGTTCCAACGTTTTATGGATGATTTTGGCATGTTGTAGGACTTGATCGCGGGGGGAACGGAGAGCTCGGCAGTGACGGTTGAATGGGCCATCTCGAACATTCTAAAACGGCCATACATCTTCGAAAAGGCAACTGAAGAGCTGGATCGGGTTATTGGGAAGAACAGGTGGGTGAAGGAGAATGATTTGGCACAGCTTCCGTATATAGAATCCATTGTGAAGGAAACGATGAGGATGCACCCGGTTGCACCAATGCTTTCACCTAGACTGTCCCGTGAGGACACCACGTTTGATGGCTATGATATTCCTGCAGGTGACATGAGTTTCATGCTTGCTTaattatgcatttatttcttttctatatacgGATATGTGATCTCATTTAAGTATGTATCTGCAACTGTATAATGTTGATATGCTCAAATCCTAGGTACGAGGGTGTTGGTGCATGTATGGACGATTGGAAGAGACCCGAAGATATGGGAGGAGCCGAATGAATTTAAACCGGAAAGATTCATGGGGAAGAAGATCGATGTAGGAGGCAATGACTTTGAGCTGTTACCATTTGGTGCAGGGAGAAGAATGTGCCCTGGTTACAGTTTGGGTTTGAAGGTGATACAGATGAGTTTGGCTAACATGTTGCATGGGTTTAAGTGGACATTGCCTGAGGGAATGAGCAAGGAAGAGCTGAGCATGGAGGAGATATTTGGATTGTCTACTCCCAAGAAAGAGCCCTTGCAGGTGGTGGTTGAGCCCAGGCTAGACAATGAGCTTTATGATCAACTCTCCGATCTTTCTGGCAATTCATTGAAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	AYM47547.1	9.0e-214	flavonoid 3'-hydroxylase
Swissprot	A0A1D6F9Y9.1	1.7e-132	Cytochrome P450 92C6
trEMBL	A0A3G2C5D4	6.5e-214	Flavonoid 3'-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07990.1	39.61	3e-113	405	CYP75B1;D501;TT7	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G00253	AT5G07990.1	515	282	7	5	499	3	508	39.61	3e-113	405
Asa1G00253	AT2G40890.1	512	301	6	4	502	1	504	37.11	2e-102	369
Asa1G00253	AT4G31940.1	527	285	11	1	499	1	523	39.85	1e-100	363

Ortholog group

Species	Genes
Allium cepa	g310383.t1; g310385.t1; g322496.t1; g348018.t1
Allium fistulosum	AfisC8G05593; AfisC8G05594; AfisC8G05600
Allium sativum	Asa1G00253.1; Asa1G00270.1; Asa1G04769.1
Arabidopsis thaliana
Oryza sativa	LOC_Os08g35510.1; LOC_Os09g08990.1; LOC_Os09g26940.1; LOC_Os09g26960.1; LOC_Os09g26980.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	31	483	327.7	1e-97

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07408	CYP1A1; cytochrome P450 family 1 subfamily A polypeptide 1	EC:1.14.14.1	Steroid hormone biosynthesis	ko00140
			Tryptophan metabolism	ko00380
			Retinol metabolism	ko00830
			Metabolism of xenobiotics by cytochrome P450	ko00980
			Ovarian steroidogenesis	ko04913

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network