Detail information of Asa1G00367


Location
GeneChrStartEndStrand
Asa1G00367chr19190925191922486-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGV31154.17.2e-121AGL6-like MADS-box protein
SwissprotQ6EU39.17.3e-86Protein MOSAIC FLORAL ORGANS 1
trEMBLT2CCV25.2e-121AGL6-like MADS-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G45650.161.905e-79 290AGL6;RSB1AGAMOUS-like 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag69743.t1
Allium fistulosumAfisC8G05475
Allium sativumAsa1G00367.1
Arabidopsis thalianaAT2G45650.1
Oryza sativaLOC_Os02g45770.1; LOC_Os04g49150.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105792.76.2e-27
PF01486.14K-boxFamily83170109.56.2e-32

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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