result

Gene information

Detail information of Asa1G00460

Location

Gene	Chr	Start	End	Strand
Asa1G00460	chr1	113958593	113961436	+

Sequences

CDS

>Asa1G00460.1
ATGGCTCTCATCCCCTTCCTACCTTCCAATCAAAACTCCAACAAATCCAGAAAAAGCAAGAACGAGAAAAGCAGAACTATCAAGAAAAAAACGAAAGCACCTCAGCTGCCGCCGCCGCCACCACCACAGGCGACGTCGTCATGGGAGCAATTCAAGAACATACTGAGCTGCAAGAGCGCGAACGACGTTCAGTCGTTGCCCGGTAAAAAAAGCACGTCGAAGAAGTACGTGAAGCTTGGGTCGACGTGTGGGGCGTCGATGTGTGCAGTTAGGGACGCGGTGCACGGGAACACCACGGCCCGGGTGGCGGACCACGGCTCTGGGTCCGACGGTGGGTCCCACGTCAACGAGAACACGCCTCTGGCTGCCGGTAGATCTGGACGGTCCGGGATGAACCTGATGAAGTTTTCCGGTTGCTACGAGTGCCATGCCGTCGACGTGCATTCTGTTTCCAGGAGGTACCCTAGGCCGAGGACGCTGTGCCCTTGCACGGAGTGCGGCGCAGTGTTTACCAAGTCGGAGAGTTTGGAAATACACCAAGCAATTCAACATGCAGTATCAGAACTGGGACCGGAGGATTCAAGCAGGAACATAGTGGAAATAATCTTCAAATCAAGCTGGCTAACCAAAAACCCAGTACAAATATGCACCATCTCCCGTATCCTCAAAGTCCACAACACCCACCGTACCATCTCCCGCTTCGAAGGCTACCGCGACTCCGTCAAAATCCGTTCCCAGCACCCGGCGAACCTCTTCCCGAAAAACAATTCCAAAAACCCACGCTGCGCCGCCGACGGCAATGAGCTGCTCCGCTTCTACTCCACCTCCATCTCCTGCTCCCTCGGATCCGACGGCTCCTCCTCCCTCTGCCTCTCCTCCAACCACTCCCCGCCATGCGCCGTCTGCCACGTCATCATGCATGGTTTCGAAGTGCCCGCCGGCGGCGGGATCGGGACCCACGCCAGCAGCGGTAGGGCCCACGAGCTCGGCTCCAAAACCAACGCCCGCATCAGGGCCATGCTCGTTTGCAGAGTCATCGCCGGCAAAGTCAAGAGAATCGGCGACGGTGCCGTCAACGGTGATGACGTGGAGGGCTATGATTCGTTCGCCAAGGATGGTGCTTTGGAAGACTTGTTCGTCTATAATGCTACGGCCATTTTGCCTTGCTTCGTTGTCATTTACCAGGCTTGA

Protein

Gene

>Asa1G00460.1
ATGGCTCTCATCCCCTTCCTACCTTCCAATCAAAACTCCAACAAATCCAGAAAAAGCAAGAACGAGAAAAGCAGAACTATCAAGAAAAAAACGAAAGCACCTCAGCtgccgccgccgccaccaccacaGGCGACGTCGTCATGGGAGCAATTCAAGAACATACTGAGCTGCAAGAGCGCGAACGACGTTCAGTCGTTGCCCGGTAAAAAAAGCACGTCGAAGAAGTACGTGAAGCTTGGGTCGACGTGTGGGGCGTCGATGTGTGCAGTTAGGGACGCGGTGCACGGGAACACCACGGCCCGGGTGGCGGACCACGGCTCTGGGTCCGACGGTGGGTCCCACGTCAACGAGAACACGCCTCTGGCTGCCGGTAGATCTGGACGGTCCGGGATGAACCTGATGAAGTTTTCCGGTTGCTACGAGTGCCATGCCGTCGACGTGCATTCTGTTTCCAGGTATTGTTTTGTTCAAGTTTTTCactgttttctattttattttagcatAGTGTAACTTTGTATGGGATGGCACTGTAGGAGGTACCCTAGGCCGAGGACGCTGTGCCCTTGCACGGAGTGCGGCGCAGTGTTTACCAAGTCGGAGAGTTTGGAAATACACCAAGCAATTCAACATGCAGgtaactcttcttcttcttcttgctctacttttttttttttttttttttttttttttttttttttttttttaaacctgttGCTCTTTATGAAAGAAGAAAATTTGATGCTCTTGGGTATAATGAGCATCATGATGTTTTGAAATGTTCCCCAAGTAATCATGCACGTTTGTCATTTGCTCCCTTTTCTTTTAACGTATATAAGCCAGTTGCCAAATTGATGCTCCCCTGAGAAAAGGATTGGGATGTCAAATGATTTAACCTTAAGATATATACCTTCTCCAGTTATCCAGTTTTTATCTTATTTTTTCAATAAAAGCTAGAACAATTAAAGCGCCAAACgtaaatgcaaaaaagaaaagataaagaaaaaaaCGCTTGTCTTGCTCTTAATTACAAAAAACATAGACAGTTGTGGACCAGTATTTTCTTTAATGCATCATAAATGAATGCGGTACTGTTAGATGTCTATTTTCAGTAAATATTCATATCATATTTGATGcttttaaatagaattggaaagcaAAAGGCAGGacaaactaaaaatagaatttgctataaaactagaaaaggaaaagaaaaaaaaaatagatgtcATCCAGTTTTGGGTTTTTCAACACAagataacatttaaaagaaatttaaacacaagaacactttttagtgtaaatcaagtaATTCGTAGACCGACCATCATTGtatattttacactaaaaagtatCATTCAACATAAATTTTTGATCTGTTATTCTTATGCCTAACATTTTCTCTAATTTTGCCCCTTACActattattttttttttctttttttttgggttTCTAATATTACTATAATAAAAGTttctacattttaaaaaaaaaaatagatttcatatttttaaaacaatgaaaactGCAAAGATACCTTGCACTTTTCCGAGAAATTgcagcttttatatatataattttatttttatcaaattcGTGCAAAACTAcacttaattaataaaattatgcataaatagtaattaatatttataaataacaaattctatttttattttaaaaatttgaaagcAAGCTTATACCTTTTATTGAAAATTTCGTGCTATTCTAATCCAAAAAAACAAAAGTAATGCCCTTGACATAAATATTGCTACATGgacttttattataatttttttacaaatatgaatGTGACTTACAAAATCTCTATTAAAAGTTcaatcttcataaaatggaagattcaaatgataaaatttatattttttttattttaaatttgaccAACGCTAGTTCAAGTATAAGAGCATCGTCAAAGCAAATATGACATAACGTGTATTGAGTCTTATGTTTAAAAGGATTAATTACAACGTTActcaaattattttttaaaatttaaacatcaCATTGAAAACGATAATACTTGTTCAACCAGCAATTCAAAGAACAGAAAACGTGGCAGCACTTGAAGCCGTCTTATTTTGTCCCCTTCATGAATTGCGTTCTCTCCGACCGCATATTTTAGAATCGGTCATCCTAGCACTTTCCCATTGAAaaacagtgaaaataatcttatgtGTAAAAGGATAAATGCAGTATCAGAACTGGGACCGGAGGATTCAAGCAGGAACAtagtggaaataatcttcaaatcAAGCTGGCTAACCAAAAACCCAGTACAAATATGCACCATCTCCCGTATCCTCAAAGTCCACAACACCCACCGTACCATCTCCCGCTTCGAAGGCTACCGCGACTCCGTCAAAATCCGTTCCCAGCACCCGGCGAACCTCTTCCCGAAAAACAATTCCAAAAACCCACGCTGCGCCGCCGACGGCAATGAGCTGCTCCGCTTCTACTCCACCTCCATCTCCTGCTCCCTCGGATCCGACGGCTCCTCCTCCCTCTGCCTCTCCTCCAACCACTCCCCGCCATGCGCCGTCTGCCACGTCATCATGCATGGTTTCGAAGTGCCCGCCGGCGGCGGGATCGGGACCCACGCCAGCAGCGGTAGGGCCCACGAGCTCGGCTCCAAAACCAACGCCCGCATCAGGGCCATGCTCGTTTGCAGAGTCATCGCCGGCAAAGTCAAGAGAATCGGCGACGGTGCCGTCAACGGTGATGACGTGGAGGGCTATGATTCGTTCGCCAAGGATGGTGCTTTGGAAGACTTGTTCGTCTATAATGCTACGGCCATTTTGCCTTGCTTCGTTGTCATTTACCAGGCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK65216.1	2.8e-90	uncharacterized protein A4U43_C07F34870
trEMBL	A0A5P1EH34	2.0e-90	C2H2-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G75710.1	42.41	3e-80	295		C2H2-like zinc finger protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G00460	AT1G75710.1	474	178	15	1	395	1	458	42.41	3e-80	295
Asa1G00460	AT4G27240.1	243	108	7	163	393	198	428	45.68	6e-48	188
Asa1G00460	AT5G54630.1	250	109	8	163	393	233	469	43.60	7e-45	178

Ortholog group

Species	Genes
Allium cepa	g371242.t1
Allium fistulosum	AfisC8G05346
Allium sativum	Asa1G00460.1
Arabidopsis thaliana	AT1G75710.1
Oryza sativa	LOC_Os04g02510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0046872	F	metal ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network