Detail information of Asa1G00799


Location
GeneChrStartEndStrand
Asa1G00799chr1198647335198652581-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020262629.11.1e-286homeobox-leucine zipper protein ROC5-like
SwissprotQ6EPF0.11.2e-245Protein RICE OUTERMOST CELL-SPECIFIC 5
trEMBLA0A5P1F9F48.2e-287Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G61150.159.640.0 900HD-GL2-1;HDG1homeodomain GLABROUS 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag288422.t1; g530912.t1
Allium fistulosumAfisC5G00212; AfisC8G05032
Allium sativumAsa1G00799.1; Asa6G06992.1
Arabidopsis thalianaAT3G61150.1; AT4G00730.1
Oryza sativaLOC_Os02g45250.1; LOC_Os04g48070.1; LOC_Os04g48070.2; LOC_Os04g48070.3; LOC_Os09g35760.1; LOC_Os09g35760.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain6612166.71e-18
PF01852.16STARTDomain265487168.11.5e-49

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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