Detail information of Asa1G00828


Location
GeneChrStartEndStrand
Asa1G00828chr1209751676209752785-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK75862.12.8e-84uncharacterized protein A4U43_C03F21330
SwissprotA2Q5W1.12.9e-25Protein ERF REQUIRED FOR NODULATION 1
trEMBLA0A5P1FCP12.0e-84AP2/ERF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G19790.172.844e-28 122RAP2.11related to AP2 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag52860.t1
Allium fistulosumAfisC8G04987
Allium sativumAsa1G00828.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain368551.48.8e-14

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.