Detail information of Asa1G01052


Location
GeneChrStartEndStrand
Asa1G01052chr1280752681280753967-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020258282.12.2e-84transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK55.13.8e-73NAC domain-containing protein 42
trEMBLA0A5P1FAN51.6e-84NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G43000.155.029e-76 280ANAC042;JUB1;NAC042NAC domain containing protein 42

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag525426.t1
Allium fistulosumAfisC8G04681
Allium sativumAsa1G01052.1
Arabidopsis thalianaAT2G43000.1
Oryza sativaLOC_Os03g56580.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily2215188.14.9e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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