result

Gene information

Detail information of Asa1G01107

Location

Gene	Chr	Start	End	Strand
Asa1G01107	chr1	292832447	292834261	-

Sequences

CDS

>Asa1G01107.1
ATGAAAATCTTGAACTACTTAAACATTTCAAGAAATCAATTACAAGGTAAACTGCCACCTTTGATTTCATCTATGCAGAGTTTAACCTCAGTAGATTTCTCGTACAACAATCTTTCTGGTATGGTTCCAGTAACTGGGCAGTTTAGTTACTTCAATGCTACATCTTTCTTGGGTAACCCAAATCTTTGCGGGCCTTATCTTGGCCCATGTAAAACAGAATTCACAGATGATTCTAAAACTAATCATACTAAAAGTGCATTCTCCGCAGCTTTTAAGCTTTTATTAGTCATAGGCTTACTAGCATGTTCAATTGCGTTTGCTATAGCGGCAATCATAAAAGCTCGAGCTTTAAAAAAGGCTAGTGAAGCCAGAGCGTGGAAGCTCACTGCTTTTCAAAGGCTAGACTTCACCTGTGATGATGTGTTAGATAGCTTAAAAGAAGAAAATATTATCGGGAAGGGAGGAGCTGGAATAGTGTATAAAGGAATCATGCCTAATGGAGGTCAAGTTGCAGTGAAAAGACTACCAGCAATGACTAGAGGTTCGTCTCACGACCATGGATTCAGCGCAGAAATTCAAACTTTGGGCCGGATAAGGCATAGACACATAGTGAGGTTATTAGGCTTTTGCTCAAATTACGATACTAACCTTCTCGTTTATGAGTACATGCCTAATGGAAGCCTTGGTGAAGTCCTCCATGGTAAAAAAGGAGGGTTCTTGAACTGGGACACCAGATATAAAATTGCCGTTGAGTCGGCCAAAGGACTTTGCTACTTGCATCACGATTGCTCTCCTTTGATTTTGCATAGAGACGTGAAGTCGAATAATATTCTTCTTGACTCGGGATTTGAGGCCCATGTTGCTGATTTTGGGCTGGCTAAGTTTTTGCAGGATTCTGGAACTTCTGAGTGCATGTCTGCTATAGCTGGTTCTTATGGATACATTGCTCCAGAGTACGCCTACACCTTAAAAGTGGACGAGAAGAGTGACGTGTACAGTTTCGGAGTGGTGCTTCTAGAGCTTCTAACTGGAAGAAAGCCCGTGGGCGAATTTGGAGATGGAGTAGACATAGTGCAATGGGTAAGAAAACAAACTGACTCGAACAAAGAGAACGTGCTCCAAATACTCGATCCTCGGCTTCATACAGTGCCTCTAGATGAAGTGATGCACGTCTTCTATGTATCCATGTTATGCGTTGAAGAACAAAGCGTAGAGAGACCTACTATGAGGGAAGTCGTTCAAATTCTAAGCGAGCTTCCAAATGCAGGGAGGACCCAGACCCAGAAGGAAGAAGAATCCGATGCTGTTCAAGCTCCACAGTCTGATTTGCTTAGTATCTAG

Protein

Gene

>Asa1G01107.1
ATGAAAATCTTGAACTACTTAAACATTTCAAGAAATCAATTACAAGGTAAACTGCCACCTTTGATTTCATCTATGCAGAGTTTAACCTCAGTAGATTTCTCGTACAACAATCTTTCTGGTATGGTTCCAGTAACTGGGCAGTTTAGTTACTTCAATGCTACATCTTTCTTGGGTAACCCAAATCTTTGCGGGCCTTATCTTGGCCCATGTAAAACAGAATTCACAGATGATTCTAAAACTAATCATACTAAAAGTGCATTCTCCGCAGCTTTTAAGCTTTTATTAGTCATAGGCTTACTAGCATGTTCAATTGCGTTTGCTATAGCGGCAATCATAAAAGCTCGAGCTTTAAAAAAGGCTAGTGAAGCCAGAGCGTGGAAGCTCACTGCTTTTCAAAGGCTAGACTTCACCTGTGATGATGTGTTAGATAgcttaaaagaagaaaatattatcgGGAAGGGAGGAGCTGGAATAGTGTATAAAGGAATCATGCCTAATGGAGGTCAAGTTGCAGTGAAAAGACTACCAGCAATGACTAGAGGTTCGTCTCACGACCATGGATTCAGCGCAGAAATTCAAACTTTGGGCCGGATAAGGCATAGACACATAGTGAGGTTATTAGGCTTTTGCTCAAATTACGATACTAACCTTCTCGTTTATGAGTACATGCCTAATGGAAGCCTTGGTGAAGTCCTCCATGGTAAAAAAGGAGGGTTCTTGAACTGGGACACCAGATATAAAATTGCCGTTGAGTCGGCCAAAGGACTTTGCTACTTGCATCACGATTGCTCTCCTTTGATTTTGCATAGAGACGTGAAGTCGAATAATATTCTTCTTGACTCGGGATTTGAGGCCCATGTTGCTGATTTTGGGCTGGCTAAGTTTTTGCAGGATTCTGGAACTTCTGAGTGCATGTCTGCTATAGCTGGTTCTTATGGATACATTGCTCCAGGTATATTTCTTTTAATACATAAATAATAGACAGAGAACATTTCTCAGTAAATTCATATTCTATATCTTGAAATTAGATGCTTCATTTTATATGATTTCTCAATTCTTTGACACAAATAAGAATCGAATGACCAATGGGTGAGACACTAGATGCCTTTTTGACATCAAAGAGTGTGTTTTCCATTGTTACTTATATGTAGTGTTACATCTACAAGTTGATATTGGGATAATTTTAAAAGTTTGTCAATTCTTTACAATTAACCAAAATTGCTTACAAGCAATTTATTTCAAGTAAGTCATTGTTGTCAACCTGTTCAATGTTCTTAGTTGTCAACCTATTCAATGTTCTTAGTCATTAGAGCAGTAAGTTGTGCAAATACAATTACAGAAGTCATAACTTATAAACTACTTTTGAGCTACTTATAAGATACCGCCAAACATTGTCTATTCATTTGCATTTGCCATGAATGCACAGAGTACGCCTACACCTTAAAAGTGGACGAGAAGAGTGACGTGTACAGTTTCGGAGTGGTGCTTCTAGAGCTTCTAACTGGAAGAAAGCCCGTGGGCGAATTTGGAGATGGAGTAGACATAGTGCAATGGGTAAGAAAACAAACTGACTCGAACAAAGAGAACGTGCTCCAAATACTCGATCCTCGGCTTCATACAGTGCCTCTAGATGAAGTGATGCACGTCTTCTATGTATCCATGTTATGCGTTGAAGAACAAAGCGTAGAGAGACCTACTATGAGGGAAGTCGTTCAAATTCTAAGCGAGCTTCCAAATGCAGGGAGGACCCAGACCCAGAAGGAAGAAGAATCCGATGCTGTTCAAGCTCCACAGTCTGATTTGCTTAGTATCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	RVW17914.1	2.1e-206	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Swissprot	O49545.1	3.4e-190	Protein BARELY ANY MERISTEM 1
trEMBL	A0A438C3S5	1.5e-206	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G65700.1	81.49	0.0	743	BAM1	Leucine-rich receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa1G01107	AT5G65700.2	443	78	1	1	443	550	988	81.49	743
Asa1G01107	AT5G65700.1	443	78	1	1	443	550	988	81.49	743
Asa1G01107	AT3G49670.1	439	90	2	1	439	551	984	78.36	701

Ortholog group

Species	Genes
Allium cepa	g181523.t1; g40147.t1; g445082.t1
Allium fistulosum	AfisC5G00428; AfisC6G01600; AfisC8G04703
Allium sativum	Asa1G01107.1; Asa6G06739.1; Asa8G04901.1
Arabidopsis thaliana	AT3G49670.1; AT4G20270.1; AT5G65700.1; AT5G65700.2
Oryza sativa	LOC_Os03g12730.1; LOC_Os03g56270.1; LOC_Os03g56270.2; LOC_Os07g04190.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	146	414	159.2	1.1e-46

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network