Detail information of Asa1G01359


Location
GeneChrStartEndStrand
Asa1G01359chr1349416474349428200+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020270236.14.5e-74nuclear transcription factor Y subunit A-10-like
SwissprotQ8LFU0.24.4e-26Nuclear transcription factor Y subunit A-10
trEMBLA0A5P1EQ823.2e-74Nuclear transcription factor Y subunit

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G06510.139.212e-31 133NF-YA10nuclear factor Y, subunit A10

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Ortholog group
SpeciesGenes
Allium cepag155182.t1
Allium fistulosumAfisC8G04293
Allium sativumAsa1G01359.1
Arabidopsis thalianaAT3G05690.1; AT5G06510.1; AT5G06510.2; AT5G06510.3
Oryza sativaLOC_Os03g44540.1; LOC_Os03g48970.1; LOC_Os03g48970.2; LOC_Os03g48970.3; LOC_Os03g48970.4; LOC_Os07g06470.1; LOC_Os07g06470.2; LOC_Os12g42400.1; LOC_Os12g42400.2; LOC_Os12g42400.3; LOC_Os12g42400.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02045.12CBFB_NFYAFamily14419896.21.2e-27

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08064NFYA, HAP2; nuclear transcription factor Y, alphaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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