Detail information of Asa1G01861


Location
GeneChrStartEndStrand
Asa1G01861chr1497150136497152148-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008796793.11.6e-82LIM domain-containing protein WLIM2b-like
SwissprotO04193.11.5e-72Widely-expressed LIM protein 2
trEMBLA0A8B7CDD51.2e-82LIM domain-containing protein WLIM2b-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G39900.165.935e-70 260WLIM2aGATA type zinc finger transcription factor family protein

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Ortholog group
SpeciesGenes
Allium cepag517106.t1; g96715.t1
Allium fistulosumAfisC1G04443; AfisC8G03414
Allium sativumAsa1G01861.1; Asa7G04930.1
Arabidopsis thalianaAT1G01780.1
Oryza sativaLOC_Os10g35930.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00412.19LIMDomain106547.41.5e-12
PF00412.19LIMDomain10916443.72.1e-11

Gene Ontology
AccessionOntologyName
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09377CSRP; cysteine and glycine-rich proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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