Detail information of Asa1G01867


Location
GeneChrStartEndStrand
Asa1G01867chr1498810321498810583+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_026407986.12.7e-18protein REVEILLE 7-like isoform X1
SwissprotQ6R0H1.28.3e-20Protein LATE ELONGATED HYPOCOTYL
trEMBLA0A834ZLB41.4e-19HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G01060.177.593e-2299.8LHY;LHY1Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag266049.t1; g330903.t1
Allium fistulosumAfisC1G06381; AfisC3G06679; AfisC3G06680
Allium sativumAsa1G00202.1; Asa1G01867.1; Asa2G05215.1; Asa7G03132.1
Arabidopsis thalianaAT1G18330.1; AT1G18330.2; AT3G10113.1; AT5G37260.1
Oryza sativaLOC_Os06g51260.1; LOC_Os06g51260.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain115547.71.2e-12

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12133LHY; MYB-related transcription factor LHYEC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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