result

Gene information

Detail information of Asa1G02049

Location

Gene	Chr	Start	End	Strand
Asa1G02049	chr1	546079985	546082338	-

Sequences

CDS

Protein

Gene

>Asa1G02049.1
ATTTTTTtatcttctatttttgtttttattgtatGGTAATAAACTAGATGGAAACAAATACAAGGGGAGCATTTatatggtatttgaatatatggaTCATGATTTATCGGGACTTTCAGATAGACCTGGTATGCGGTTCACCGTACCTCAAATAAAGGTACTTATCACAAATTAGAAAAAGTGATTTGTTGGTTGACATTTGAGTCCTTATTTGTTTATTAAACCTTTTGCCAGTGCTACATGAAGCAATTGCTAACTGGATTGCAATATTGCCATGTAAATCAAGTTCTTCATCGCGACATAAAAGGTTAGCTCTGACCAAATAGTCATCTTGAAAATTGTAGCTACAGTTTTCTAACCTTGCTTCACTGCATATATTCTTCAGGATCCAATTTGGTAATTGATAATGAGGGAAAACTGAAGCTTGCAAATTTTGGTCTTGCTCGTTCATTTTCAAGTGATCACAATGGGAACTTAACAAATCGTGTAATCACTCTGTGGTATAGGTAATGATTGTCGATGTATCGCTTTACCATGTCACACCGATATTTATCTGTTTTTAAATCAATCAAACGATTGTCGCAGGCCCCCTGAGCTTCTACTTGGAACCACAAAATATGGCTCGGCTAAAGATATGTGGTCTGTGGGTTGCATATTTGCAGGGCTTTTACATGGTAAACCTATTTTGTCAGCGAAAAATGAGGTAATATGTTACTATAGATCCTCCGTTCTTTATTTTGGTTTTCCAGAAGTACTTCTTACAgttattttgattaattttataACACCCGTTATATATCACTTTTATCATACCAAACTTTAAGAAGCTTTTATATATTTGCACAATGGCAGAGCCATTTGATTGGAAAACTAGAGCTCCTTTCATTCTGGAACCATTTCCCCACTACAttaataattattccaatttcaattACCATGTAGGTTGTCTAATATATAAGGTGCATATGCATGGTAGTTGTATGTGCTACTCGCTATTCTCAAGATCGTCAACGGCcaatagtaataaaagataacGTTGACGCATAGTAATCACAACATCAACAGTATGAATATAATAGCAGTGGAAAGAAGATCACATAGTCGAGTTTATACTAGTTCGAATCTCCAATTCTACATCgggtctcaatatatatatatactgccttTTTACTGACACACACTCGCGCGAGGAACCTGAGCAGCAGTACAAGATTTCAATATATTTGTCTGAACAGCCGACGGAGACTTAAGTACCTTTGTTGTAGCAACAAAACAAGACTTGAACTTTGTGAACAAAAGTTACTGCTGTAGCAACAAAACAAGACTTCAACTTTGTGAACAAAAGTTACTTTCATcttaatttacaaatttatctCCTTTAGTGCACAGCCTCCTATAACCATCACAGACAATATTGAGACTAATGAACGAGGTGTATAGAAAATAATATGCCTTTGCTGGGCAGAGTGGAGTAACAATATGATGCCCAAAGTGTCTTAATTTGTTGTTTTGAGTGTTTTAGAAATGaatgtataataaataaaaattggagtttttgatttgagaaaaaaaaataatttcaatcaagaGAGCAGATATGAAGCTTATATAAGAGAGTGAAAGGAACAATTAAATAAGTGCAATCCTTAAGAAATTTGTTAGGCAAAGAGTAAGAGTAACACTGAATGGACAAGAAGtatcgtttgaaaaatataaccattggaGGAATTTTAAACACGTGATTTAAGGTAGCACAACACAACATTGTGCTTTAGAAAACACTATAAAGTCCACTTGGAATGTAACCGTCGGAGCCTTGCCATTTTCGGCTAAAATGTTATGCTTTGCTACTGTGAAAAAATTGCTTCTATTTTGTCCTTTACTAACATTTCTTACCATTTTTCTTCcatttaaaagaaaaatctaataaaatgttaaatatattgatattagttgttttctagaaatttaaaGTGGCTTGGAGTTTGTTTGTGCGGTCTTAACCGTCTTAGACTGTAATAACTTGATTTTGCCTAAGCTTATAACATACATTCTTTTGAAGCTCTTTAGTCCGAACACTTCTCAATTGAAGTATCCTTCGTATCATGTACGAACACTTCTCAATTGCtcaagttaattttaaaatttggttgGGAATTAATTATGGCTCGGCTTCACTGAAACTGAGCGTTACGCTTAGCTTctctgagccgtaatgctcagttaaactgagctgtaaggctcaagtgaaactgagctttacggctcagttgaaactgagcttaaggctcaaCAAAACTGAGCTTGTGGCTGAGTTTCAGCCGAGCcttacgctcagcgaaactgagccgtaa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020083429.1	3.6e-59	cyclin-dependent kinase C-2
Swissprot	Q6I5Y0.1	1.9e-60	Cyclin-dependent kinase C-1
trEMBL	A0A6P5EJ51	2.6e-59	cyclin-dependent kinase C-2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G10270.1	86.67	9e-69	255	CDKC;1	cyclin-dependent kinase C;1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G02049	AT5G10270.1	135	18	14	148	104	238	86.67	9e-69	255
Asa1G02049	AT5G64960.1	135	19	14	148	104	238	85.93	2e-67	251
Asa1G02049	AT5G64960.2	135	19	14	148	51	185	85.93	4e-67	250

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	21	154	132.4	1.7e-38

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08819	CDK12_13; cyclin-dependent kinase 12/13	EC:2.7.11.22 2.7.11.23	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network