result

Gene information

Detail information of Asa1G02354

Location

Gene	Chr	Start	End	Strand
Asa1G02354	chr1	637895464	637896513	+

Sequences

CDS

>Asa1G02354.1
ATGGAAAGATCTAGAAAAAGCACCGAGAGCTCCGACACAAGTCGCCGACAGAAGAAAGGCAAAGGATTGCAGGCAGCTTCTCCTACCAAGGATCTGAAACAAGTGCCCATTTTTGCAGAGGCGCCATGTTTAAACGTACAGCATCCATCTCTACACTCTCCTTGCTATTCTTCTGTTTCAAACCCTCCTACTCCCAAGTCCGTACCCAACTTCCCTTTTCTACCCACCTCAACTCTATACCCACAGCAACAGCAGATGATTTCGTTTGGGCTTGAAACCCCACCGTTTCAGATGTTCACAGCACAGCAGCAGCAGCAACTATACCAGGAACAGCTATTCAGAACCTGGAGCCAGGCGCTGAATCTAAGTCCTCGTGGCCACAGAATGATGATGGATCGAATTGCTGCCTCAAACACACTGAATCATCATCATCATCATCAGCAGCAGCAGCAGGGGATTATGCCATTGGTTCATACGCCAACAAAGCTGTACAGAGGAGTTAGGCAGAGGCATTGGGGCAAATGGGTGGCTGAGATTCGTCTACCCAAGAACCGCACCAGGCTCTGGCTGGGCACGTTCGACACAGCCGAGGATGCCGCCATGGCATACGACCGCGAAGCTTTCAAATTGAGAGGCGAAAACGCTCGCCTCAACTTCCCTCATCTCTTCCTTGGCAAAGACAAAGACAAAGACAAGGACAAATCTAGTGTCGATGAATCTTCAGCGTCTGCTTCAGAGATACCTGTAGCTACAGCTGAAGAAAATTCAGCGACTAATGAAACGGTTGAAGAAAAATCGATGATGTCTGAAACGAGTTCGCAGCAATCTCATGCTGAACTGATGTGGGGAGATGCCGATGAGGCGTGGTTCAACACTTGGGGGCCTGGAAGCTCAGTTTGGGATGACATAGATGGAGCTAATAGTCTGCTTCTTCAGTCTGCAACTGCATCGGCTGTGGATCATAATCAAGAAACAAGCGCGAATTATGCCGATAATTCGGCTTCTCAAGATTCATACATTTCAAACATGTTCATATGGAAGGATGCATAG

Protein

Gene

>Asa1G02354.1
ATGGAAAGATCTAGAAAAAGCACCGAGAGCTCCGACACAAGTCGCCGACAGAAGAAAGGCAAAGGATTGCAGGCAGCTTCTCCTACCAAGGATCTGAAACAAGTGCCCATTTTTGCAGAGGCGCCATGTTTAAACGTACAGCATCCATCTCTACACTCTCCTTGCTATTCTTCTGTTTCAAACCCTCCTACTCCCAAGTCCGTACCCAACTTCCCTTTTCTACCCACCTCAACTCTATACCCACAGCAACAGCAGATGATTTCGTTTGGGCTTGAAACCCCACCGTTTCAGATGTTCACAGCACAGCAGCAGCAGCAACTATACCAGGAACAGCTATTCAGAACCTGGAGCCAGGCGCTGAATCTAAGTCCTCGTGGCCACAGAATGATGATGGATCGAATTGCTGCCTCAAACACACtgaatcatcatcatcatcatcagcagCAGCAGCAGGGGATTATGCCATTGGTTCATACGCCAACAAAGCTGTACAGAGGAGTTAGGCAGAGGCATTGGGGCAAATGGGTGGCTGAGATTCGTCTACCCAAGAACCGCACCAGGCTCTGGCTGGGCACGTTCGACACAGCCGAGGATGCCGCCATGGCATACGACCGCGAAGCTTTCAAATTGAGAGGCGAAAACGCTCGCCTCAACTTCCCTCATCTCTTCCTTGGCAAAGACAAAGACAAAGACAAGGACAAATCTAGTGTCGATGAATCTTCAGCGTCTGCTTCAGAGATACCTGTAGCTACAGCTGAAGAAAATTCAGCGACTAATGAAACGGTTGAAGAAAAATCGATGATGTCTGAAACGAGTTCGCAGCAATCTCATGCTGAACTGATGTGGGGAGATGCCGATGAGGCGTGGTTCAACACTTGGGGGCCTGGAAGCTCAGTTTGGGATGACATAGATGGAGCTAATAGTCTGCTTCTTCAGTCTGCAACTGCATCGGCTGTGGATCATAATCAAGAAACAAGCGCGAATTATGCCGATAATTCGGCTTCTCAAGATTCATACATTTCAAACATGTTCATATGGAAGGATGCATAG

Functional annotation

Database	accession number	e-value	annotation
nr	AXY87696.1	2.2e-54	ethylene-responsive transcription factor ERF-like protein
Swissprot	Q9SKT1.1	8.5e-35	Ethylene-responsive transcription factor ERF053
trEMBL	A0A455LAE5	1.6e-54	Ethylene-responsive transcription factor ERF-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G20880.1	46.41	1e-41	167	AtERF53;ERF53	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G02354	AT2G20880.1	237	72	7	82	302	116	313	46.41	1e-41	167
Asa1G02354	AT4G28140.1	274	110	9	46	304	36	269	39.78	8e-39	157
Asa1G02354	AT1G36060.1	66	10	0	157	222	136	201	84.85	2e-30	130

Ortholog group

Species	Genes
Allium cepa	g12361.t1
Allium fistulosum	AfisC8G02916
Allium sativum	Asa1G02354.1
Arabidopsis thaliana	AT2G20880.1; AT4G28140.1
Oryza sativa	LOC_Os02g42585.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	164	213	46.6	2.7e-12

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network