Detail information of Asa1G02401


Location
GeneChrStartEndStrand
Asa1G02401chr1649317409649318038-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrABF59740.12.1e-52CBF-like transcription factor
SwissprotQ9FJ93.14.6e-44C-repeat/dehydration-responsive element-binding factor 4
trEMBLA0A2S1VVP21.5e-52Cbf-like transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G51990.150.474e-49 191CBF4;DREB1DC-repeat-binding factor 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag406168.t1; g66628.t1; g66629.t1
Allium fistulosumAfisC6G00132; AfisC8G02877; AfisC8G02878; AfisC8G02879
Allium sativumAsa1G02377.1; Asa1G02394.1; Asa1G02396.1; Asa1G02398.1; Asa1G02399.1; Asa1G02401.1; Asa1G02402.1
Arabidopsis thalianaAT4G25470.1; AT4G25480.1; AT4G25490.1; AT5G51990.1
Oryza sativaLOC_Os02g45450.1; LOC_Os04g48350.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain419052.15.1e-14

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.