result

Gene information

Detail information of Asa1G02673

Location

Gene	Chr	Start	End	Strand
Asa1G02673	chr1	727906192	727908379	+

Sequences

CDS

Protein

Gene

>Asa1G02673.1
ATGAGAGGAACTCTTCCTTGGATGGCATCTGAACTTCTTAATGGAAATTCTAGTCTCGCATCTAGTAaggtattattatttttcatctcAATATGATATTCAATGCACTACTGAACCTGCTGAAACTTCTAGAGAGAAGATTAGCATAGGTGCCAAACTTgactattcttttcaatataatttcgaTTTATTTCCTGTAACGTCTCGGATATATTATCTTATCACATATTTTGTATCCTACATGTCAGCATTTGTCCTTGCTTCATTGGCCCTATTcagctatattattttaaatttggccCAAAAAAATTGATATAATTCAACCATGTTGTTTCAATATAGCTTAGATTCAATGTAGATTGtgaaaataatttatgtttatacttCATACGTAATTTCAGGTTGATGTGTTTTCTTTTGGCATCGTGATGTGGGAGCTCATTACTGGACAAGAACCATATCATGATCTGCATCAAGGAACCATTATTGGTAAGCCTATCTGGCTATCTTCTCCATTTTCCAACTTTTGATGCTTCAGCTGCTTAGCTTAATGCTCAATTGTAAATGTTATCCTTTACTTCTAAAATTAAACTAGTGCATAACAGAAACATAGTATTTAGTTTCCATGAATTAATAGTGAAATTTGTCATTACTGTTAGAATAATcgaataaaactaaaaataaaataaacaggaagaagagagaaggagagAACCTATGGCGCGGATATGAAACAAATCAGATGGTGTGGAATTTTGCAGGTACAAATTATGTTTTTTGTATACGATTTAATGTTTTAAACTGCAATTGTATTGTCTTTTTTTAAGTCTGGATCTAATCGAAAATATGTATTCTTCAAGTTACAACTATTCAGTATTTCTTTTTTGTTATGTTAGTACATTAACAAATGAAAACCAGAAAATGAGTTTCATATTATGTGGGACTAGATCATCAGCTCAGGTAGAAAATCAGAGTAGGCATTTATTAAATGGTATGGACTAGAAAACTTAATGATTGCAAAGGATGATGGAGTGAATGGTGATGTAGTAGCTGAGAAGGTACAATATATTTCCTGATATATCTTCAACCAAATGATCATtacttatttggcataatttaagcaactaataatatttttgtttcgcttAAGGTACTCCCAAATGATAATACAAAATATGAGTATAATGCAGCAACATAAAATTATGAGGATTTGATGGCTGTTGGGTTAACAGAAACTATGAAGGTTTTTTCTTGTCTTAGATACTGTTCAACTATTTATTCAGGCTCAACAGCTAAACAGAGGTATTTTTGAGACGATATATTATCATGCTTTAAAAGCTTCTTCAGAAATTGCAGCAAGAGAAGGCATTTATGAAACTTATCAAGGAAGTCCTGTCAGTAATGTATGCACATTTTATCAGTCCTGTTATTAGAGTTTCTAAAATTTTCAATATGCAATTTATTTGTTTTGGGATAACATGGAATATTTTCTCTCATTTCGTCATTCATGCCTCTGTGGCATGTTTATGCCTATGCTATGacattattttactttataatgagTTATATTAAGGTGGTCAATTTTTTCAACGAGTCTATCGGGAATACCAAGTTCATACAGTGATACAGTAATGAATCCTTGCTAGTCTTAAGTAATGAATCAACAGTCCATGGTGAATCTCTCTGTCAACCACATGACTTCACAAATGAAATGATTATTCTGGTACTTCCAGTTCCAGGGAACATCAGTTCAACCTATGAGTCCGATTGTGATAGCTATTCGATGGAGAAGAAACTAGTAAAAGGAAAGATTGTGGTGTGTCATAGGTCACCAAGCAGTCCTTTGTGACTACATCCAATAGATGGGACTGGCCTGAACTTAGAAAAATGATATCTCAACATGGAGTTAGAAACTCTCTTCTTGTTGCACCAATGCCTACTGCCTCAACAAGTCAAATACTACGAAACAACGAATGCTTTGAGCCCTACACATCAAACATTTACAGCTGCAGAGTGCTAAGGTTTTCTTTAATGGCCTTTTAAAGCTTGATACATCTTCAAGCCCATTGAACAGATCTCTAACTTgttgattttgtatttttttttctttaaacttatattttcacttttcagtgGAGAGTTCGTAGATGTGAATAAGCACCTACATAGATCAAGCAGTGAGTTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916428.1	7.6e-44	ribonucleoside-diphosphate reductase large subunit isoform X2
Swissprot	Q9SJ20.1	2.4e-42	Ribonucleoside-diphosphate reductase R1 subunit
trEMBL	A0A6J0PGG2	5.5e-44	Ribonucleoside-diphosphate reductase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G21790.1	76.47	1e-45	179	ATRNR1;CLS8;DPD2;R1;RNR1	ribonucleotide reductase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G02673	AT2G21790.1	119	25	1	75	190	542	660	76.47	1e-45	179
Asa1G02673	AT3G46920.1	53	11	0	1	53	1055	1107	79.25	3e-20	95.1
Asa1G02673	AT1G04700.1	53	14	0	1	53	933	985	73.58	1e-18	89.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	4	57	40.7	1.5e-10
PF02867.12	Ribonuc_red_lgC	Family	75	192	107.0	8.4e-31

Gene Ontology

Accession	Ontology	Name
GO:0006260	P	DNA replication
GO:0004672	F	protein kinase activity
GO:0005524	F	ATP binding
GO:0055114	P	oxidation-reduction process
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K10807	RRM1; ribonucleoside-diphosphate reductase subunit M1	EC:1.17.4.1	Purine metabolism	ko00230
			Pyrimidine metabolism	ko00240
			Glutathione metabolism	ko00480
			Drug metabolism - other enzymes	ko00983

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network