result

Gene information

Detail information of Asa1G03119

Location

Gene	Chr	Start	End	Strand
Asa1G03119	chr1	843769813	843773132	-

Sequences

CDS

>Asa1G03119.1
ATGCATCTAAATGGTATCGATGATGCTTTAAATGGAACAAGTGGATACACTTATTGGGGTACAAGCTATGGAAGACAGAAACAACAAATGTTGTTTTTTACAGCTTCAACACCTGATCATAATGGAGTTATATCACTTGGTATTCAAATGGAAAATTACAGGAACCATGTACTGCCCAGTAACACACATAATTATGGTACTAAAATGTTCTTATCTCCAAATGATGATAAGATACATGAGTATAGTGGTGCTGCTTCCCACAATTTCCAGTGGACCCCTGAACAAATCGACTCTGTTTGCAATGCAAAGAACAAGAATTCGAGAAAGAATCAGCTTTTTGATTGTTTTTCTTTCGATGTAGGGGGAATGAAAATGGTGGTTGCTGCATTAACCTACATAAAAGAAGTTATCAACATCGAACATGTTCAGGCGCTGAATGCAGCCATTATTTCACTGCTGTGCATTCTAATTCTTGGCTTGGTTACTGAAAGTTACATAATGCTACTGATGTATAGAAACTCAATGAAAAAGGAGATATGCTTCAAGGCCGACTTGATAAAATTAAAAGAAGCAGTACAACAAGCAGAGAGGAAGAGTATGAACAAGAGCTTGGCATTTGCTAGTGCTAGTCACGATGTACGCAACTCGCTTTCTGGTATTACTGGGCTCATTGAGCTTTGTCGTAAAGAAGTACGATCGAACTACACATCCATTCAATTGAATGAGAACTTAGCGCAAATGCAAGCTTGTGCATCTGAACTTTTAGGTATAGTAAACTCTGTGCTGGACATGAGTAAAGTTGAAGCTGGTAAATTGCAATTAGAAGAGGCAGAGTTTGATATTGGTCAAGTTATTGAAGATTCCGTTGATTTTTGCAATATTGCCGCTTTGGATAAAGGGTTGGAGGTCATATGGGATCCTTGTGACTTCTCCATTTTGAATGCTTCTAGAGTCAAAGGAGATTGTAGAAGATTCAAACAAATTCTTGACAATTTGCTTTGTAATGCGAGGAAGTTCACACAAAGTGGTCATATAGTGTTGCGTGGATGGGCCTCAAAGCAAAATGAATATGATATTAGTCACAACTTGATTGAGTTTGTGTTCGAGGTTGATGACACGGGTATCGGTATTCCAAAAGAGAAGAGAGAATCCATATTTGAAAATTATGTTCAGGTTAAAGAATCTGCTTTTCAAGGCCAAGAAGGCACTGGTTTAGGACTTGGCATTGTGCAGTCACTTGTGCGTTTGATGGGAGGAGATATTGGAGTAATAGATAAAGTGCGTGGGGAGAAAGGAGCATGCTTCAGATTTAATATCATTCTAAAAGCAGCTGATATCGATAATTTTGAACCAGCAAACTGTCTGAAAGAATTCACAGAGATGGCGAAAGCAAGAGGTACAACGAAGTCAATATTATTAGTGTCTGGGAATGAAACAAGAAGAATTTTGAAACATTTCATGGAAAACATAGGCATTGAAGCTAACATAGTTGAAAGCTGGGAGCAAGTTGATCCCACAGTTGTGAAAAGCAGACGCATCGTCAGTAAAAGATTTAGAAGAAGCGGATCTTCAAACAGGATAACATCCTCAGACAACAAAACAGAAGACCAAACTCTTCAAGTCAGCTTGAATGATCTTTTGTGTGCTAGTAAAAGATTTAAAGATTCATCATCATCCAATTTCATTTTGATTCTCATCGACATCGATAGCTGTGGAGGATTCTCAAATATGTATTCAGTCTTAGACAAATTTTCAAAGTTCAAATTTGAGAATAACAACAAACTATCACATTTTATGATTGTTTGTCTAGTAAATCCAGGAACACATAGTGAAGAAATCAATAGGATAATAGAAACTTCTTGTGTTCCATTAAGGAAACCTATTCATGGTTCAAGGTTTCGTGACATTATAAGAATGATCCAAGAATTTGGAGGAAATGAAGAAGATAAAGTTTCTAATTTACCTAGAGAACCACGATCGAAACTGGAAAGCATTGATACAGAAGTTAACACTGAAGAACAAAACCAACTTAATGGAATGAGAATTCTACTAGTAGAAGACGTAATGGTGATGAGAATTATTGCTGTTCAGGTACTGTCAAAACTTGGGGCAGAAGTAGAAGTTGCAGCTAATGGTTCGATTGCTGTAAATATGATTAAGGACGCACTGCAAAACTTATTTTGCCATTATACTGAAATAGGCAAGGGCAAACGTTTGCCTTACGATGTTGTTCTTATGGACTGTGAGATGCCCGTAATGAATGGATTTGAGGCAACCAAAAGTATACGTGAAGAGGAAAAGAAATACGGAATTCATATTCCTATTGTTGCTCTTACTGGACATGCAGAACGCGATCAAATCGACAAGGCTAGTTCCGCAGGAATGGACCTTCACTTGTCAAAGCCAATAACTGAAGAAAATATACTTAAAGCTATCAGACAAGTAATGCAATGTAGATGA

Protein

Gene

>Asa1G03119.1
ATGCATCTAAATGGTATCGATGATGCTTTAAATGGAACAAGTGGATACACTTATTGGGGTACAAGCTATGGAAGACAGAAACAACAAATGTTGTTTTTTACAGCTTCAACACCTGATCATAATGGAGTTATATCACTTGGTATTCAAATGGAAAATTACAGGAACCATGTACTGCCCAGTAACACACATAATTATGGTACTAAAATGTTCTTATCTCCAAATGATGATAAGATACATGAGTATAGTGGTGCTGCTTCCCACAATTTCCAGTGGACCCCTGAACAAATCGACTCTGTTTGCAATGCAAAGAACAAGAATTCGAGAAAGAATCAGCTTTTTGATTGTTTTTCTTTCGATGTAGGGGGAATGAAAATGGtatgaaatttttaataaaatgattttcttttagcATGCAAGTtatgatcactaacaatgctattaCTGTACAGGTGGTTGCTGCATTAACCTACATAAAAGAAGTTATCAACATCGAACATGTTCAGGCGCTGAATGCAGCCATTATTTCACTGCTGTGCATTCTAATTCTTGGCTTGGTTACTGAAAGTTACATAATGCTACTGATGTATAGAAACTCAATGAAAAAGGAGATATGCTTCAAGGCCGACTTGATAAAATTAAAAGAAGCAGTACAACAAGCAGAGAGGAAGAGTATGAACAAGAGCTTGGCATTTGCTAGTGCTAGTCACGATGTACGCAACTCGCTTTCTGGTATTACTGGGCTCATTGAGCTTTGTCGTAAAGAAGTACGATCGAACTACACATCCATTCAATTGAATGAGAACTTAGCGCAAATGCAAGCTTGTGCATCTGAACTTTTAGGTATAGTAAACTCTGTGCTGGACATGAGTAAAGTTGAAGCTGGTAAATTGCAATTAGAAGAGGCAGAGTTTGATATTGGTCAAGTTATTGAAGATTCCGTTGATTTTTGCAATATTGCCGCTTTGGATAAAGGGTTGGAGGTCATATGGGATCCTTGTGACTTCTCCATTTTGAATGCTTCTAGAGTCAAAGGAGATTGTAGAAGATTCAAACAAATTCTTGACAATTTGCTTTGTAATGCGAGGAAGTTCACACAAAGTGGTCATATAGTGTTGCGTGGATGGGCCTCAAAGCAAAATGAATATGATATTAGTCACAACTTGATTGAGTTTGTGTTCGAGGTTGATGACACGGGTATCGGTATTCCAAAAGAGAAGAGAGAATCCATATTTGAAAATTATGTTCAGGTTAAAGAATCTGCTTTTCAAGGCCAAGAAGGCACTGGTTTAGGACTTGGCATTGTGCAGTCACTTGTAAGCAGTTgtcttttctttatttttgatttaatatccaaTTAAGCTGACACTGACCATAACTTATAAGCCTTATAATACTGGAAAAATATTCACCAGCTCCAACTCATTCTTTAGGGCATGTTTGGTAACTATTTATTGCTAGCCAAAGCTACTTATAATTAGCTTATTTGAGTTTGGATGTCTGGAAACTGATTATTATGAGGTATCACAAATGGTTTAGAAGCTAAATTTCATGAAACAATTGTAATTGTTCTTTATAACTTATTAcagaatttttattaaataattaaaataaccttGTTATTTTAAACAATCTATATGCAAGATTCCATTACTTGTTATTCGGTCATTTTATACGGAtacttcaaataattaatttggtataaaataataatttctaaaccATAGTAGTTAAATTGCTAGAACTAACGCATTTTGATGtaaatgttactactaaaatttCTTTTTATGATGATTTAAATAAGTAGTAGTCAAATGACCTCTTAGACTTCTCTTtataaaagtaaaaagaaaaaagttGTCATCAAGGTTGATATTTCGGTGCTTGGGCCAGAAAGCTAATATTTCTGAAAATATACTGTTTTGTATACTAATATCATATGTTATATGTAAAGGTGCGTTTGATGGGAGGAGATATTGGAGTAATAGATAAAGTGCGTGGGGAGAAAGGAGCATGCTTCAGATTTAATATCATTCTAAAAGCAGCTGatatcgataattttgaaccaGCAAACTGTCTGAAAGAATTCACAGAGATGGCGAAAGCAAGAGGTACAACGAAGTCAATATTATTAGTGTCTGGGAATGAAACAAGAAGAATTTTGAAACATTTCATGGAAAACATAGGCATTGAAGCTAACATAGTTGAAAGCTGGGAGCAAGTTGATCCCACAGTTGTGAAAAGCAGACGCATCGTCAGTAAAAGATTTAGAAGAAGCGGATCTTCAAACAGGATAACATCCTCAGACAACAAAACAGAAGACCAAACTCTTCAAGTCAGCTTGAATGATCTTTTGTGTGCTAGTAAAAGATTTAAAGATTCATCATCATCCAATTTCATTTTGATTCTCATCGACATCGATAGCTGTGGAGGATTCTCAAATATGTATTCAGTCTTAGacaaattttcaaagttcaaatttgagAATAACAACAAACTATCACATTTTATGATTGTTTGTCTAGTAAATCCAGGAACACATAGTGAAGAAATCAATAGGATAATAGAAACTTCTTGTGTTCCATTAAGGAAACCTATTCATGGTTCAAGGTTTCGTGACATTATAAGAATGATCCAAGAATTTGGAGGAAATGAAGAAGATAAAGTTTCTAATTTACCTAGAGAACCACGATCGAAACTGGAAAGCATTGATACAGAAGTTAACACTGAAGAACAAAACCAACTTAATGGAATGAGAATTCTACTAGTAGAAGACGTAATGGTGATGAGAATTATTGCTGTTCAGGTACTGTCAAAACTTGGGGCAGAAGTAGAAGTTGCAGCTAATGGTTCGATTGCTGTAAATATGATTAAGGACGCACTGCAAAACTTATTTTGCCATTATACTGAAATAGGCAAGGGCAAACGTTTGCCTTACGATGTTGTTCTTATGGACTGTGAGGTAAAAATAACTATAGCAGTGTTGTCTTATTTccttacacacacacacgtgtgtgtatgtgtctatatacacacagacacacacacacaaacatagaCGCATAAATGTAgaagttttttattttgttttatgctgtTGTTTTGAGCAGATGCCCGTAATGAATGGATTTGAGGCAACCAAAAGTATACGTGAAGAGGAAAAGAAATACGGAATTCATATTCCTATTGTTGCTCTTACTGGACATGCAGAACGCGATCAAATCGACAAGGCTAGTTCCGCAGGAATGGACCTTCACTTGTCAAAGCCAATAACTGAAGAAAATATACTTAAAGCTATCAGACAAGTAATGCAATGTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269943.1	7.2e-173	probable histidine kinase 2
Swissprot	A2YA15.1	6.2e-121	Probable histidine kinase 2
trEMBL	A0A5P1EIY3	5.2e-173	Histidine kinase CKI1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G47430.1	31.10	1e-110	397	CKI1	Signal transduction histidine kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G03119	AT2G47430.1	971	475	32	2	812	181	1117	31.10	1e-110	397
Asa1G03119	AT2G17820.1	509	287	15	40	503	336	815	29.08	2e-44	178
Asa1G03119	AT2G17820.1	157	80	2	674	812	1038	1192	36.31	1e-20	99.0

Ortholog group

Species	Genes
Allium cepa	g430525.t1; g430526.t1; g430527.t1; g430535.t1; g430539.t1; g430540.t1; g430541.t1; g430545.t1
Allium fistulosum	AfisC8G02084
Allium sativum	Asa1G03119.1
Arabidopsis thaliana	AT2G47430.1
Oryza sativa	LOC_Os06g08450.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00512.22	HisKA	Domain	203	270	40.3	2.1e-10
PF02518.23	HATPase_c	Domain	320	439	76.3	2.3e-21
PF00072.21	Response_reg	Domain	682	813	72.6	2.5e-20

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0016020	C	membrane
GO:0007165	P	signal transduction
GO:0005524	F	ATP binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0016310	P	phosphorylation
GO:0016772	F	transferase activity, transferring phosphorus-containing groups

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K19691	NIK1, TCSC; osomolarity two-component system, sensor histidine kinase NIK1	EC:2.7.13.3	Two-component system	ko02020

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network